Centre for Urban Studies

Photographer: Teska Overbeeke

prof. dr. P.M.A. (Peter) Sloot


  • Faculty of Science
    Informatics Institute
  • Visiting address
    OTM 145-147
    Room number: IAS
  • Postal address:
  • P.M.A.Sloot@uva.nl
    T: 0205252863
    T: 0651564723

Feel free to visit my home pages by clicking on the link below

2018

  • Presbitero, A., Mancini, E., Brands, R., Krzhizhanovskaya, V. V., & Sloot, P. M. A. (2018). Supplemented alkaline phosphatase supports the immune response in patients undergoing cardiac surgery: Clinical and computational evidence. Frontiers in Immunology, 9(OCT), [2342]. DOI: 10.3389/fimmu.2018.02342 
  • Melnikov, V., Krzhizhanovskaya, V. V., Lees, M. H., & Sloot, P. M. A. (2018). System dynamics of human body thermal regulation in outdoor environments. Building and Environment, 143, 760-769. DOI: 10.1016/j.buildenv.2018.07.024  [details] 
  • Mancini, E., Quax, R., De Luca, A., Fidler, S., Stohr, W., & Sloot, P. M. A. (2018). A study on the dynamics of temporary HIV treatment to assess the controversial outcomes of clinical trials: An in-silico approach. PLoS One, 13(7), [e0200892]. DOI: 10.1371/journal.pone.0200892  [details] 
  • Sienkiwicz, J., Soja, K., Holyst, J. A., & Sloot, P. M. A. (2018). Categorical and Geographical Separation in Science. Scientific Reports, 8, [8253]. DOI: 10.1038/s41598-018-26511-4  [details] 
  • Kovalchuk, S. V., Krzhizhanovskaya, V. V., Koumoutsakos, P., Chatzi, E., Lees, M. H., Dongarra, J., & Sloot, P. M. A. (2018). The art of computational science: Bridging gaps – forming alloys. Journal of Computational Science, 26, 190-192. DOI: 10.1016/j.jocs.2018.04.014  [details] 
  • Sheraton, M. V., Yam, J. K. H., Oh, H. S., Mancini, E., Yang, L., Rice, S. A., & Sloot, P. M. A. (2018). Mesoscopic Energy Minimization Drives Pseudomonas aeruginosa Biofilm Morphologies and Consequent Stratification of Antibiotic Activity Based on Cell Metabolism. Antimicrobial Agents and Chemotherapy, 62(4), [e02544-17]. DOI: 10.1128/AAC.02544-17  [details] 
  • Quax, R., Chliamovitch, G., Dupuis, A., Falcone, J-L., Chopard, B., Hoekstra, A. G., & Sloot, P. M. A. (2018). Information processing features can detect behavioral regimes of dynamical systems. Complexity, 2018, [6047846]. DOI: 10.1155/2018/6047846  [details] 
  • Roy, D., Lees, M. H., Pfeffer, K., & Sloot, P. M. A. (2018). Spatial segregation, inequality, and opportunity bias in the slums of Bengaluru. Cities : The International Journal of Urban Policy and Planning, 74, 269-276. DOI: 10.1016/j.cities.2017.12.014  [details] 
  • Roy, D., Palavalli, B., Menon, N., King, R., Pfeffer, K., Lees, M., & Sloot, P. M. A. (2018). Survey-based socio-economic data from slums in Bangalore, India. Scientific Data, 5, [170200]. DOI: 10.1038/sdata.2017.200  [details] 

2017

  • Roy, D., Lees, M. H., Pfeffer, K., & Sloot, P. M. A. (2017). Modelling the impact of household life cycle on slums in Bangalore. Computers, Environment and Urban Systems, 64, 275-287. DOI: 10.1016/j.compenvurbsys.2017.03.008  [details] 
  • de Graaf, C. S. L., Kandhai, D., & Sloot, P. M. A. (2017). Efficient Estimation of Sensitivities for Counterparty Credit Risk with the Finite Difference Monte Carlo Method. Journal of Computational Finance, 21(1), 83-113. DOI: 10.2139/ssrn.2521431 , 10.21314/JCF.2016.325  [details] 
  • Kovalchuk, S. V., Abuhay, T. M., Altintas, I., Norman, M. L., Lees, M. H., Krzhizhanovskaya, V. V., ... Sloot, P. M. A. (2017). Data through the Computational Lens. Journal of Computational Science, 20, 81-84. DOI: 10.1016/j.jocs.2017.05.003  [details] 
  • Quax, R., Har-Shemesh, O., & Sloot, P. M. A. (2017). Quantifying Synergistic Information Using Intermediate Stochastic Variables. Entropy, 19(2), [85]. DOI: 10.3390/e19020085  [details] 
  • Sloot, P. M. A. (2017). More likely we would be ritually slaughtered. In S. Thurner (Ed.), 43 Visions for Complexity (pp. 65-66). (Exploring complexity; Vol. 3). Singapore: World Scientific Publishing Co. Pte. Ltd. DOI: 10.1142/9789813206854_0033  [details] 
  • Traag, V. A., Quax, R., & Sloot, P. M. A. (2017). Modelling the distance impedance of protest attendance. Physica A: Statistical Mechanics and its Applications, 468, 171-182. DOI: 10.1016/j.physa.2016.10.054  [details] 
  • Car, J., Tan, W. S., Huang, Z., Sloot, P., & Franklin, B. D. (2017). eHealth in the future of medications management: personalisation, monitoring and adherence. BMC Medicine, 15, [73]. DOI: 10.1186/s12916-017-0838-0  [details] 
  • Koumoutsakos, P., Chatzi, E., Krzhizhanovskaya, V. V., Lees, M., Dongarra, J., & Sloot, P. M. A. (2017). The Art of Computational Science, Bridging Gaps - Forming Alloys: Preface for ICCS 2017. Procedia Computer Science, 108, 1-2. DOI: 10.1016/j.procs.2017.05.281  [details] 
  • Koumoutsakos, P., Chatzi, E., Krzhizhanovskaya, V. V., Lees, M., Dongarra, J., & Sloot, P. M. A. (2017). The Art of Computational Science, Bridging Gaps - Forming Alloys: Preface for ICCS 2017. Procedia Computer Science, 108, 1-6. DOI: 10.1016/j.procs.2017.05.281  [details] 
  • Melnikov, V., Krzhizhanovskaya, V. V., & Sloot, P. M. A. (2017). Models of Pedestrian Adaptive Behaviour in Hot Outdoor Public Spaces. Procedia Computer Science, 108, 185-194. DOI: 10.1016/j.procs.2017.05.006  [details] 
  • Presbitero, A., Quax, R., Krzhizhanovskaya, V., & Sloot, P. (2017). Anomaly Detection in Clinical Data of Patients Undergoing Heart Surgery. Procedia Computer Science, 108, 99-108. DOI: 10.1016/j.procs.2017.05.002  [details] 

2016

  • Altintas, I., Norman, M., Lees, M., Krzhizhanovskaya, V. V., Dongarra, J., & Sloot, P. M. A. (2016). Data through the Computational Lens, Preface for ICCS 2016. Procedia Computer Science, 80, 1-7. DOI: 10.1016/j.procs.2016.05.426  [details] 
  • Har-Shemesh, O., Quax, R., Miñano, B., Hoekstra, A. G., & Sloot, P. M. A. (2016). Nonparametric estimation of Fisher information from real data. Physical Review E, 93(2), [023301]. DOI: 10.1103/PhysRevE.93.023301  [details] 
  • Har-Shemesh, O., Quax, R., Hoekstra, A. G., & Sloot, P. M. A. (2016). Information geometric analysis of phase transitions in complex patterns: the case of the Gray-Scott reaction-diffusion model. Journal of Statistical Mechanics : Theory and Experiment, 2016(4), [043301]. DOI: 10.1088/1742-5468/2016/04/043301  [details] 
  • Donald Combs, C., Barham, S. R., & Sloot, P. M. A. (2016). Systems Biology and Health Systems Complexity. In C. D. Combs, J. A. Sokolowski, & C. M. Banks (Eds.), The Digital Patient: Advancing Healthcare, Research, and Education (pp. 73-84). (Wiley series in Modeling and Simulation). Hoboken, NJ: Wiley. DOI: 10.1002/9781118952788.ch7  [details] 
  • Presbitero, A., Krzhizhanovskaya, V., Mancini, E., Brands, R., & Sloot, P. (2016). Immune System Model Calibration by Genetic Algorithm. Procedia Computer Science, 101, 161-171. DOI: 10.1016/j.procs.2016.11.020  [details] 
  • Presbitero, A., Krzhizhanovskaya, V., Mancini, E., Brands, R., & Sloot, P. (2016). Reproducibility of Two Innate Immune System Models. In A. V. Chugunov, R. Bolgov, Y. Kabanov, G. Kampis, & M. Wimmer (Eds.), Digital Transformation and Global Society: First International Conference, DTGS 2016, St. Petersburg, Russia, June 22-24, 2016 : revised selected papers (pp. 501-514). (Communications in Computer and Information Science; Vol. 674). Cham: Springer. DOI: 10.1007/978-3-319-49700-6_50  [details] 
  • Viswanathan, V., Lees, M., & Sloot, P. M. A. (2016). The influence of memory on indoor environment exploration: A numerical study. Behavior Research Methods, 48(2), 621-639. DOI: 10.3758/s13428-015-0604-1  [details] 

2015

  • Merelli, E., Rucco, M., Sloot, P., & Tesei, L. (2015). Topological Characterization of Complex Systems: Using Persistent Entropy. Entropy, 17(10), 6872-6892. DOI: 10.3390/e17106872  [details] 
  • Javaheri, N., Dries, R., Burson, A., Stal, L. J., Sloot, P. M. A., & Kaandorp, J. A. (2015). Temperature affects the silicate morphology in a diatom. Scientific Reports, 5, [11652]. DOI: 10.1038/srep11652  [details] 
  • Krzhizhanovskaya, V. V., Dukhanov, A. V., Bilyatdinova, A., Boukhanovsky, A. V., & Sloot, P. M. A. (2015). Russian-Dutch double-degree Master’s programme in computational science in the age of global education. Journal of Computational Science, 10, 288-298. DOI: 10.1016/j.jocs.2015.05.001  [details] 
  • Mei, S., Chen, B., Zhu, Y., Lees, M. H., Boukhanovsky, A. V., & Sloot, P. M. A. (2015). Simulating city-level airborne infectious diseases. Computers, Environment and Urban Systems, 51, 97-105. DOI: 10.1016/j.compenvurbsys.2014.12.002  [details] 
  • Mei, S., Zarrabi, N., Lees, M., & Sloot, P. M. A. (2015). Complex agent networks: An emerging approach for modeling complex systems. Applied Soft Computing, 37, 311-321. DOI: 10.1016/j.asoc.2015.08.010  [details] 
  • Melnikova, N., Jordan, D., Krzhizhanovskaya, V., & Sloot, P. (2015). Numerical prediction of the IJkDijk trial embankment failure. Proceedings of the Institution of Civil Engineers. Geotechnical Engineering, 168(2), 158-171. DOI: 10.1680/geng.14.00040  [details] 
  • Pyayt, A. L., Shevchenko, D. V., Kozionov, A. P., Mokhov, I. I., Lang, B., Krzhizhanovskaya, V. V., & Sloot, P. M. A. (2015). Combining data-driven methods with finite element analysis for flood early warning systems. Procedia Computer Science, 51, 2347-2356. DOI: 10.1016/j.procs.2015.05.404  [details] 
  • Duijn, P. A. C., & Sloot, P. M. A. (2015). From Data to Disruption. Digital Investigation, 11, 39-45. DOI: 10.1016/j.diin.2015.09.005  [details] 
  • Koziel, S., Leifsson, L., Lees, M., Krzhizhanovskaya, V. V., Dongarra, J., & Sloot, P. M. A. (2015). Computational Science at the Gates of Nature, preface for ICCS 2015. Procedia Computer Science, 51, 1-8. DOI: 10.1016/j.procs.2015.05.177  [details] 
  • Melnikov, V. R., Krzhizhanovskaya, V. V., Boukhanovsky, A. V., & Sloot, P. M. A. (2015). Data-driven modeling of transportation systems and traffic data analysis during a major power outage in the Netherlands. Procedia Computer Science, 66, 336-345. DOI: 10.1016/j.procs.2015.11.039  [details] 

2014

  • Bui, Q. C., Sloot, P. M. A., van Mulligen, E. M., & Kors, J. A. (2014). A novel feature-based approach to extract drug-drug interactions from biomedical text. Bioinformatics, 30(23), 3365-3371. DOI: 10.1093/bioinformatics/btu557  [details] 
  • Duan, W., Quax, R., Lees, M., Qiu, X., & Sloot, P. M. A. (2014). Topology dependent epidemic spreading velocity in weighted networks. Journal of Statistical Mechanics : Theory and Experiment, 2014(12), [P12020]. DOI: 10.1088/1742-5468/2014/12/P12020  [details] 
  • Erdbrink, C. D., Krzhizhanovskaya, V. V., & Sloot, P. M. A. (2014). Free-surface flow simulations for discharge-based operation of hydraulic structure gates. Journal of Hydroinformatics, 16(1), 189-206. DOI: 10.2166/hydro.2013.215  [details] 
  • Erdbrink, C. D., Krzhizhanovskaya, V. V., & Sloot, P. M. A. (2014). Reducing cross-flow vibrations of underflow gates: experiments and numerical studies. Journal of Fluids and Structures, 50, 25-48. DOI: 10.1016/j.jfluidstructs.2014.06.010  [details] 
  • Mei, S., Zhu, Y., Qiu, X., Zhou, X., Zu, Z., Boukhanovsky, A. V., & Sloot, P. M. A. (2014). Individual decision making can drive epidemics: a fuzzy cognitive map study. IEEE Transactions on Fuzzy Systems, 22(2), 264-273. DOI: 10.1109/TFUZZ.2013.2251638  [details] 
  • Pyayt, A. L., Kozionov, A. P., Kusherbaeva, V. T., Mokhov, I. I., Krzhizhanovskaya, V. V., Broekhuijsen, B. J., ... Sloot, P. M. A. (2014). Signal analysis and anomaly detection for flood early warning systems. Journal of Hydroinformatics, 16(5), 1025-1043. DOI: 10.2166/hydro.2014.067  [details] 
  • Pyayt, A. L., Kozionov, A. P., Mokhov, I. I., Lang, B., Meijer, R. J., Krzhizhanovskaya, V. V., & Sloot, P. M. A. (2014). Time-frequency Methods for Structural Health Monitoring. Sensors, 14(3), 5147-5173. DOI: 10.3390/s140305147  [details] 
  • Roy, D., Lees, M. H., Palavalli, B., Pfeffer, K., & Sloot, M. A. P. (2014). The emergence of slums: A contemporary view on simulation models. Environmental Modelling & Software, 59, 76-90. DOI: 10.1016/j.envsoft.2014.05.004  [details] 
  • Bilyatdinova, A., Dukhanov, A., Bochenina, K., Boukhanovsky, A. V., Krzhizhanovskaya, V. V., & Sloot, P. M. A. (2014). Dutch-Russian Double Degree Master's Program Curricula in Computational Science and High Performance Computing. In 2014 IEEE Frontiers in Education Conference: FIE 2014 : Opening Innovations and Internationalization in Engineering Education : October 22-25, 2014, Madrid, Spain, Melia Castilla Hotel & Convention Center : proceedings Piscataway, NJ: IEEE. DOI: 10.1109/FIE.2014.7044195  [details] 
  • Cheong, S. A., Tan, T. L., Chen, C-C., Chang, W-L., Liu, Z., Chew, L. Y., ... Johnson, N. F. (2014). Short-Term Forecasting of Taiwanese Earthquakes Using a Universal Model of Fusion-Fission Processes. Scientific Reports, 4, [3624]. DOI: 10.1038/srep03624  [details] 
  • Dijkstra, L. J., Yakushev, A. V., Duijn, P. A. C., Boukhanovsky, A. V., & Sloot, P. M. A. (2014). Inference of the Russian drug community from one of the largest social networks in the Russian Federation. Quality and Quantity, 48(5), 2739-2755. DOI: 10.1007/s11135-013-9921-6  [details] 
  • Duijn, P. A. C., Kashirin, V., & Sloot, P. M. A. (2014). The Relative Ineffectiveness of Criminal Network Disruption. Scientific Reports, 4, [4238]. DOI: 10.1038/srep04238  [details] 
  • Dukhanov, A. V., Krzhizhanovskaya, V. V., Bilyatdinova, A., Boukhanovsky, A. V., & Sloot, P. M. A. (2014). Double-degree Master's Program in Computational Science: Experiences of ITMO University and University of Amsterdam. Procedia Computer Science, 29, 1433-1445. DOI: 10.1016/j.procs.2014.05.130  [details] 
  • Mordvintsev, A. S., Krzhizhanovskaya, V. V., Lees, M. H., & Sloot, P. M. A. (2014). Simulation of City Evacuation Coupled to Flood Dynamics. In U. Weidmann, U. Kirsch, & M. Schreckenberg (Eds.), Pedestrian and Evacuation Dynamics 2012 (pp. 485-499). Cham: Springer. DOI: 10.1007/978-3-319-02447-9_40  [details] 
  • Viswanathan, V., Lee, C. E., Lees, M. H., Cheong, S. A., & Sloot, P. M. A. (2014). Quantitative Comparison Between Crowd Models for Evacuation Planning and Evaluation. The European Physical Journal B. Condensed Matter Physics, 87(2), 27. [27]. DOI: 10.1140/epjb/e2014-40699-x  [details] 

2013

2012

  • Bui, Q. C., & Sloot, P. M. A. (2012). A robust approach to extract biomedical events from literature. Bioinformatics, 28(20), 2654-2661. DOI: 10.1093/bioinformatics/bts487  [details] 
  • Erdbrink, C. D., Krzhizhanovskaya, V. V., & Sloot, P. M. A. (2012). Controlling flow-induced vibrations of flood barrier gates with data-driven and finite-element modelling. In F. Klijn, & T. Schweckendiek (Eds.), Comprehensive flood risk management: research for policy and practice (pp. 425-434). Boca Raton, FL: CRC Press. [details] 
  • Mancini, E., Gastiglione, F., Bernaschi, M., de Luca, A., & Sloot, P. M. A. (2012). HIV reservoirs and immune surveillance evasion cause the failure of structured treatment interruptions: a computational study. PLoS One, 7(4), [e36108]. DOI: 10.1371/journal.pone.0036108  [details] 
  • Qiu, G., Kandhai, D., Johnson, N. F., & Sloot, P. M. A. (2012). Understanding complex dynamics in derivatives finance: why do options markets smile? Advances in Complex Systems, 15(5), [1250050]. DOI: 10.1142/S0219525912500506  [details] 
  • Zarrabi, N., Prosperi, M., Belleman, R. G., Colafigli, M., De Luca, A., & Sloot, P. M. A. (2012). Combining epidemiological and genetic networks signifies the importance of early treatment in HIV-1 transmission. PLoS One, 7(9), e46156. DOI: 10.1371/journal.pone.0046156  [details] 
  • Adamatzky, A., Akl, S., Alonso-Sanz, R., van Dessel, W., Ibrahim, Z., Ilachinski, A., ... Yang, X-S. (2012). Biorationality of motorways. In A. Adamatzky (Ed.), Bioevaluation of world transport networks (pp. 309-325). Singapore: World Scientific. [details] 
  • Adamatzky, A., Lees, M., & Sloot, P. M. A. (2012). Physarum in the Netherlands: responding to the flood. In A. Adamatzky (Ed.), Bioevaluation of world transport networks (pp. 213-234). Singapore: World Scientific. [details] 

2011

  • Altintas, I., Anand, M. K., Vuong, T. N., Bowers, S., Ludäscher, B., & Sloot, P. M. A. (2011). A data model for analyzing user collaborations in workflow-driven e-Science. The International Journal of Computers and Their Applications (IJCA), 18(3), 160-179. [details] 
  • Bui, Q. C., Katrenko, S., & Sloot, P. M. A. (2011). A hybrid approach to extract protein-protein interactions. Bioinformatics, 27(2), 259-265. DOI: 10.1093/bioinformatics/btq620  [details] 
  • Mei Shan, A., Quax, R., van de Vijver, D., Zhu, Y., & Sloot, P. M. A. (2011). Increasing risk behaviour can outweigh the benefits of antiretroviral drug treatment on the HIV incidence among men-having-sex-with-men in Amsterdam. BMC Infectious Diseases, 11(118). DOI: 10.1186/1471-2334-11-118  [details] 
  • Mościcki, J. T., Lamanna, M., Bubak, M., & Sloot, P. M. A. (2011). Processing moldable tasks on the grid: late job binding with lightweight user-level overlay. Future Generation Computer Systems, 27(6), 725-736. DOI: 10.1016/j.future.2011.02.002  [details] 
  • Murtaza, S., Hoekstra, A. G., & Sloot, P. M. A. (2011). Cellular automata simulations on a FPGA cluster. International Journal of High Performance Computing Applications, 25(2), 193-204. DOI: 10.1177/1094342010383138  [details] 
  • Naumov, L., Hoekstra, A., & Sloot, P. (2011). Cellular automata models of tumour natural shrinkage. Physica A : Statistical Mechanics and its Applications, 390(12), 2283-2290. DOI: 10.1016/j.physa.2011.02.006  [details] 
  • Quax, R., Bader, D. A., & Sloot, P. M. A. (2011). SEECN: simulating complex systems using dynamic complex networks. International Journal for Multiscale Computational Engineering, 9(2), 201-214. DOI: 10.1615/IntJMultCompEng.v9.i2.50  [details] 
  • Bankhead, A., Mancini, E., Sims, A. C., Baric, R. S., McWeeney, S., & Sloot, P. M. A. (2011). A simulation framework to investigate in vitro viral infection dynamics. Procedia Computer Science, 4, 1798-1807. DOI: 10.1016/j.procs.2011.04.195  [details] 

2010

  • Altintas, I., Anand, M. K., Crawl, D., Bowers, S., Belloum, A., Missier, P., ... Sloot, P. M. A. (2010). Understanding collaborative studies through interoperable workflow provenance. In D. L. McGuinness, J. R. Michaelis, & L. Moreau (Eds.), Provenance and Annotation of Data and Processes: third International Provenance and Annotation Workshop, IPAW 2010, Troy, NY, USA, June 15-16, 2010 : revised selected papers (pp. 42-58). (Lecture Notes in Computer Science; Vol. 6378). Berlin: Springer. DOI: 10.1007/978-3-642-17819-1_6  [details] 
  • Bui, Q. C., Ó Nualláin, B., Boucher, C. A., & Sloot, P. M. A. (2010). Extracting causal relations on HIV drug resistance from literature. BMC Bioinformatics, 11, 101. DOI: 10.1186/1471-2105-11-101  [details] 
  • Cui, J., Kaandorp, J. A., Sloot, P. M. A., & Thiagarajan, P. S. (2010). Simulating Calcineurin-Centered Calcium Signaling Network in Cardiac Myocytes. In J. E. García, & V. R. Wright (Eds.), Congestive heart failure: symptoms, causes and treatment (pp. 111-127). (Cardiology research and clinical developments). New York: Nova Publishers. [details] 
  • Mei, S., van de Vijver, D., Xuan, L., Zhu, Y., & Sloot, P. M. A. (2010). Quantitatively evaluating interventions in the influenza A (H1N1) epidemic on China campus grounded on individual-based simulations. Procedia Computer Science, 1, 1675-1682. DOI: 10.1016/j.procs.2010.04.187  [details] 
  • Mei, S., Sloot, P. M. A., Quax, R., Zhu, Y., & Wang, W. (2010). Complex agent networks explaining the HIV epidemic among homosexual men in Amsterdam. Mathematics and Computers in Simulation, 80(5), 1018-1030. DOI: 10.1016/j.matcom.2009.12.008  [details] 
  • Naumov, L., Hoekstra, A., & Sloot, P. (2010). The influence of mitoses rate on growth dynamics of a cellular automata model of tumour growth. Procedia Computer Science, 1, 971-978. DOI: 10.1016/j.procs.2010.04.107  [details] 
  • Qiu, G., Kandhai, D., & Sloot, P. M. A. (2010). Modeling options markets by focusing on active tradersr. Procedia Computer Science, 1, 2457-2462. DOI: 10.1016/j.procs.2010.04.277  [details] 
  • Sloot, P. M. A., & Hoekstra, A. G. (2010). Multi-scale modelling in computational biomedicine. Briefings in Bioinformatics, 11(1), 142-152. DOI: 10.1093/bib/bbp038  [details] 
  • Zarrabi, N., Mancini, E., Tay, J., Shahand, S., & Sloot, P. M. A. (2010). Modeling HIV-1 intracellular replication: two simulation approaches. Procedia Computer Science, 1, 555-564. DOI: 10.1016/j.procs.2010.04.059  [details] 
  • Zudilova-Seinstra, E. V., de Koning, P. J. H., Suinesiaputra, A., van Schooten, B. W., van der Geest, R. J., Reiber, J. H. C., & Sloot, P. M. A. (2010). Evaluation of 2D and 3D glove input applied to medical image analysis. International Journal of Human-Computer Studies, 68(6), 355-369. DOI: 10.1016/j.ijhcs.2009.08.001  [details] 
  • Zudilova-Seinstra, E., van Schooten, B., Suinesiaputra, A., van der Geest, R., van Dijk, B., Reiber, J., & Sloot, P. (2010). Exploring individual user differences in the 2D/3D interaction with medical image data. Virtual Reality, 14(2), 105-118. DOI: 10.1007/s10055-009-0131-4  [details] 
  • van Dijk, D., Ertaylan, G., Boucher, C. A. B., & Sloot, P. M. A. (2010). Identifying potential survival strategies of HIV-1 through virus-host protein interaction networks. BMC Systems Biology, 4, 96. DOI: 10.1186/1752-0509-4-96  [details] 
  • van Dijk, D., Sloot, P. M. A., Tay, J. C., & Schut, M. C. (2010). Individual-based simulation of sexual selection: A quantitative genetic approach. Procedia Computer Science, 1, 2003-2011. DOI: 10.1016/j.procs.2010.04.224  [details] 
  • Frentz, D., Boucher, C. A. B., Assel, M., De Luca, A., Fabbiani, M., Incardona, F., ... van de Vijver, D. A. M. C. (2010). Comparison of HIV-1 genotypic resistance test interpretation systems in predicting virological outcomes over time. PLoS One, 5(7), e11505. DOI: 10.1371/journal.pone.0011505  [details] 
  • Jaeger, S., Ertaylan, G., van Dijk, D., Leser, U., & Sloot, P. (2010). Inference of surface membrane factors of HIV-1 infection through functional interaction networks. PLoS One, 5(10), e13139. DOI: 10.1371/journal.pone.0013139  [details] 
  • Prosperi, M. C. F., Rosen-Zvi, M., Altman, A., Zazzi, M., Di Giambenedetto, S., Kaiser, R., ... Sönnerborg, A. (2010). Antiretroviral therapy optimisation without genotype resistance testing: a perspective on treatment history based models. PLoS One, 5(10), e13753. DOI: 10.1371/journal.pone.0013753  [details] 
  • Schwiegelshohn, U., Badia, R. M., Bubak, M. T., Danelutto, M., Dustdar, S., Gagliardi, F., ... von Voigt, G. (2010). Perspectives on grid computing. Future Generation Computer Systems, 26(8), 1104-1115. DOI: 10.1016/j.future.2010.05.010  [details] 
  • Sottoriva, A., Verhoeff, J. J. C., Borovski, T., McWeeney, S. K., Naumov, L., Medema, J. P., ... Vermeulen, L. (2010). Cancer stem cell tumor model reveals invasive morphology and increased phenotypical heterogeneity. Cancer Research, 70(1), 46-56. DOI: 10.1158/0008-5472.CAN-09-3663  [details] 
  • Sottoriva, A., Sloot, P. M. A., Medema, J. P., & Vermeulen, L. (2010). Exploring cancer stem cell niche directed tumor growth. Cell Cycle, 9(8), 1472-1479. DOI: 10.4161/cc.9.8.11198  [details] 

2009

  • Axner, L., Hoekstra, A. G., Jeays, A., Lawford, P., Hose, R., & Sloot, P. M. A. (2009). Simulations of time harmonic blood flow in the Mesenteric artery: comparing finite element and lattice Boltzmann methods. BioMedical Engineering OnLine, 8, 23. DOI: 10.1186/1475-925X-8-23  [details] 
  • Bossenbroek, A., Tirado-Ramos, A., & Sloot, P. M. A. (2009). Grid resource allocation by means of option contracts. IEEE Systems Journal, 3(1), 49-64. DOI: 10.1109/JSYST.2008.2011255  [details] 
  • Cui, J., Kaandorp, J. A., Sloot, P. M. A., Lloyd, C. M., & Filatov, M. V. (2009). Calcium homeostasis and signaling in yeast cells and cardiac myocytes. FEMS Yeast Research, 9(8), 1137-1147. DOI: 10.1111/j.1567-1364.2009.00552.x  [details] 
  • Gubala, T., Bubak, M., & Sloot, P. M. A. (2009). Semantic Integration for Research Environments. In M. Cannataro (Ed.), Handbook of research on computational grid technologies for life sciences, biomedicine, and healthcare (pp. 514-530). Hershey, Pa.: Medical Information Science Reference. [details] 
  • Kroc, J., & Sloot, P. M. A. (2009). Complex systems modeling by cellular automata. In J. R. Rabuñal Dopico, J. Dorado de la Calle, & A. Pazos Sierra (Eds.), Encyclopedia of artificial intelligence (pp. 353-360). Hershey, PA: Information Science Reference. [details] 
  • Murtaza, S., Hoekstra, A. G., & Sloot, P. M. A. (2009). Compute bound and I/O bound Cellular Automata simulations on FPGA logic. ACM Transactions on Reconfigurable Technology and Systems, 1(4), 23. [details] 
  • Quax, R., Bader, D. A., & Sloot, P. M. A. (2009). Simulating individual-based models of epidemics in hierarchical networks. Lecture Notes in Computer Science, 5544, 725-734. DOI: 10.1007/978-3-642-01970-8_72  [details] 
  • Sloot, P. M. A., Coveney, P. V., Ertaylan, G., Müller, V., Boucher, C. A., & Bubak, M. (2009). HIV decision support: From molecule to man. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences, 367(1898), 2691-2703. DOI: 10.1098/rsta.2009.0043  [details] 
  • Strijkers, R. J., Muller, L., Cristea, M. L., Belleman, R., de Laat, C., Sloot, P., & Meijer, R. (2009). Interactive control over a programmable computer network using a multi-touch surface. Lecture Notes in Computer Science, 5545, 719-728. DOI: 10.1007/978-3-642-01973-9_80  [details] 
  • Zudilova-Seinstra, E. V., Sloot, P. M. A., de Koning, P. J. H., Suinesiaputra, A., van der Geest, R. J., & Reiber, J. H. C. (2009). Exploring 2D/3D input techniques for medical image analysis. In E. Banissi, M. Sarfraz, F. Khosrowshahi, J. Counsell, R. Laing, C. Moore, A. J. Cowell, M. Hou, G. Y. Tian, M. Dastbaz, M. Bannatyne, J. J. Zhang, V. Scarano, R. De Chiara, U. Erra, A. Ursyn, ... H. Levkowitz (Eds.), International Conference on Information Visualisation, track Biomedical Visualization (MediViz09), Barcelona, Spain (pp. 147-152). Los Alamitos, CA: IEEE Computer Society. DOI: 10.1109/VIZ.2009.18  [details] 
  • Assel, M., van de Vijver, D., Libin, P., Theys, K., Harezlak, D., Ó Nualláin, B., ... Sloot, P. (2009). A collaborative environment allowing clinical investigations on integrated biomedical databases. Studies in Health Technology and Informatics, 147, 51-61. DOI: 10.3233/978-1-60750-027-8-51  [details] 
  • Caroprese, L., Sloot, P. M. A., Ó Nualláin, B., & Zumpano, E. (2009). A logical framework for detecting anomalies in drug resistance algorithms. In B. C. Desai (Ed.), Proceedings of IDEAS'09: International Database Engineering & Applications Symposium : Cetraro - Calabria - Italy : 16-18 September 2009 (pp. 23-30). (ACM International Conference Proceedings Series). New York, NY: Association for Computing Machinery. DOI: 10.1145/1620432.1620436  [details] 

2008

  • Korkhov, V. V., Krzhizhanovskaya, V. V., & Sloot, P. M. A. (2008). A grid-based virtual reactor: Parallel performance and adaptive load balancing. Journal of Parallel and Distributed Computing, 68(5), 596-608. DOI: 10.1016/j.jpdc.2007.08.010  [details] 
  • Murtaza, S., Hoekstra, A. G., & Sloot, P. M. A. (2008). Floating point based Cellular Automata simulations using a dual FPGA-enabled system. In V. Kindratenko (Ed.), 2008 Second International Workshop on High-Performance Reconfigurable Computing Technology and Applications (HPRCTA): proceedings: held in conjunction with SC 08, Austin, TX, November 17, 2008 Piscataway, NJ: IEEE. DOI: 10.1109/HPRCTA.2008.4745686  [details] 
  • Rycerz, K., Bubak, M., & Sloot, P. M. A. (2008). Dynamic interactions in HLA component model for multiscale simulations. Lecture Notes in Computer Science, 5102, 217-226. DOI: 10.1007/978-3-540-69387-1_24  [details] 
  • Rycerz, K., Bubak, M., & Sloot, P. M. A. (2008). HLA component based environment for distributed multiscale simulations. In T. Priol, & M. Vanneschi (Eds.), From grids to service and pervasive computing (pp. 229-239). New York, NY: Springer. DOI: 10.1007/978-0-387-09455-7_17  [details] 
  • Rycerz, K., Bubak, M., & Sloot, P. M. A. (2008). HLA component model on the example of multiscale simulation. In M. Bubak, M. Turała, & K. Wiatr (Eds.), Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings (pp. 272-275). Kraków: Academic Computer Centre CYFRONET AGH. [details] 
  • Rycerz, K., Bubak, M., & Sloot, P. M. A. (2008). Using HLA and Grid for distributed multiscale simulations. Lecture Notes in Computer Science, 4967, 780-787. DOI: 10.1007/978-3-540-68111-3_82  [details] 
  • Rycerz, K., Bubak, M., Sloot, P., & Getov, V. (2008). Problem solving environment for distributed interactive applications. In S. Gorlatch, M. Bubak, & T. Priol (Eds.), Achievements in European research on grid systems: CoreGRID Integration Workshop 2006 (selected papers), October 19-20, Krakow, Poland (pp. 55-66). New York, NY: Springer. DOI: 10.1007/978-0-387-72812-4_5  [details] 
  • Sloot, P. M. A., Ivanov, S. V., Boukhanovsky, A. V., van de Vijver, D. A. M. C., & Boucher, C. A. B. (2008). Stochastic simulation of HIV population dynamics through complex network modelling. International Journal of Computer Mathematics, 85(8), 1175-1187. DOI: 10.1080/00207160701750583  [details] 
  • Sloot, P. (2008). ViroLab: From the molecule to the man. eStrategies Projects, (4), 53-55. [details] 
  • Sloot, P., Coveney, P., Bubak, M. T., Vandamme, A-M., Ó Nuallain, B., van de Vijver, D., & Boucher, C. (2008). ViroLab: A collaborative decision support system in viral disease treatment. Reviews in Antiviral Therapy, 3, 4-7. [details] 
  • Sloot, P., Coveney, P., Bubak, M. T., Vandamme, A-M., Ó Nualláin, B., van de Vijver, D., & Boucher, C. (2008). Multi-science decision support for HIV drug resistance treatment. Studies in Health Technology and Informatics, 138, 188-198. [details] 
  • Tirado-Ramos, A., Sloot, P. M. A., & Bubak, M. (2008). Grid­based interactive decision support in biomedicine. In E-G. Talbi, & A. Y. Zomaya (Eds.), Grid computing for bioinformatics and computational biology (pp. 225-246). (Wiley series on bioinformatics : computational techniques and engineering). Hoboken, NJ: Wiley. DOI: 10.1002/9780470191637.ch10  [details] 
  • Guisado, J. L., Fernández de Vega, F., Jiménez Morales, F., Iskra, K. A., & Sloot, P. M. A. (2008). Parallel Cellular Automata-based simulation of laser dynamics using dynamic load balancing. In Ó. Garnica (Ed.), First International Workshop on Parallel Architectures and Bioinspired Algorithms (pp. 49-55). Madrid: Universidad Complutense de Madrid. [details] 
  • Guisado, J. L., Fernández de Vega, F., Jiménez Morales, F., Iskra, K. A., & Sloot, P. M. A. (2008). Using cellular automata for parallel simulation of laser dynamics with dynamic load balancing. International Journal of High Performance Systems Architecture (IJHPSA), 1(4), 251-259. DOI: 10.1504/IJHPSA.2008.024209  [details] 
  • Guo, Z., Sloot, P. M. A., & Tay, J. C. (2008). A hybrid agent-based approach for modeling microbiological systems. Journal of Theoretical Biology, 255(2), 163-175. DOI: 10.1016/j.jtbi.2008.08.008  [details] 
  • Huang, H-C., Konagaya, A., Lanza, V., & Sloot, P. M. A. (2008). Guest Editorial Introduction to the Special Section on BioGrid: Biomedical Computations on the Grid. IEEE Transactions on Information Technology in Biomedicine, 12(2), 133-137. DOI: 10.1109/TITB.2008.918585  [details] 

2007

  • Axner, L., Lätt, J., Hoekstra, A. G., Chopard, B., & Sloot, P. M. A. (2007). Simulating Time Harmonic Flows with the Regularized L-BGK Method. International Journal of Modern Physics C, 18, 661-666. DOI: 10.1142/S0129183107010917  [details] 
  • Axner, L., Hoekstra, A. G., & Sloot, P. M. A. (2007). Simulating Time Harmonic Flows with the Lattice Boltzmann Method. Physical Review E, 036709. [details] 
  • Bubak, M. T., Gubala, T., Kasztelnik, M., Malawski, M., Nowakowski, P., & Sloot, P. M. A. (2007). Collaborative Virtual Laboratory for e-Health. In P. Cunningham, & M. Cunningham (Eds.), Expanding the Knowledge Economy: Issues, Applications, Case Studies, eChallenges e-2007 Conference Proceedings (pp. 537-544). Amsterdam: IOS Press. [details] 
  • Ertaylan, G., & Sloot, P. M. A. (2007). A complex automata model of HIV-1 co-receptor tropism: Understanding mutation rate pressure. In Reviews in Antiretroviral Therapy (Vol. 2). Washington D.C., USA.
  • Hoekstra, A. G., & Sloot, P. M. A. (2007). Modelleren en Simuleren. In T. M. A. Bemelmans, M. van Keulen, R. J. Kusters, & M. Looijen (Eds.), ICT-Zakboek (PBNA Polyzakboekjes). Den Haag: Reed Business Information. [details] 
  • Hoekstra, A. G., Portegies Zwart, S., Bubak, M., & Sloot, P. M. A. (2007). Towards distributed petascale computing. In D. A. Bader (Ed.), Petascale computing: Algorithms and applications (pp. 147-164). (Chapman & Hall/CRC Computational Science; No. 1). Boca Raton: Chapman & Hall/CRC. [details] 
  • Krzhizhanovskaya, V. V., Gorbachev, Y. E., Zatevakhin, M. A., & Sloot, P. M. A. (2007). Virtual Reactor -- Computational Environment for Multidimensional Simulation of Plasma Chemical Processing. In Proceedings of the XV International Conference on Computational Mechanics and Modern Applied Software Systems Alushta, Ukraine: MAI.
  • Qiu, G., Kandhai, B. D., & Sloot, P. M. A. (2007). Understanding the complex dynamics of stock markets through cellular automata. Physical Review E, 75, 046116. [details] 
  • Sloot, P. M. A., & Hoekstra, A. G. (2007). Modeling Dynamic Systems with Cellular Automata. In P. A. Fishwick (Ed.), Handbook of Dynamic System Modeling (pp. 1-20). Chapman & Hall/CRC. [details] 
  • Sloot, P. M. A., Frenkel, D., van der Vorst, H. A., van Kampen, A., Bal, H., Klint, P., ... Langedoen, K. G. (2007). Computational e-Science: Studying complex systems in silico. A National Coordinated Initiative. White Paper. Amsterdam, the Netherlands: Unknown Publisher. [details] 
  • Sloot, P. M. A., Tirado Ramos, A., & Bubak, M. T. (2007). Multi-Science Decision Support for HIV Drug Resistance Treatment. In P. Cunningham, & M. Cunningham (Eds.), Expanding the Knowledge Economy: Issues, Applications, Case Studies, eChallenges e-2007 Conference Proceedings (pp. 597-606). Amsterdam: IOS Press. [details] 
  • Mo'scicki, J., Bubak, M. T., Lee, H. C., Muraru, A., & Sloot, P. M. A. (2007). Quality of Service on the Grid with User Level Scheduling. In M. T. Bubak, M. Turala, & K. Wiatr (Eds.), CGW'06 Proceedings (pp. 119-129). Cracow, Poland. [details] 
  • Murtaza, S., Hoekstra, A. G., & Sloot, P. M. A. (2007). Performance Modeling of 2D Cellular Automata on FPGA. In K. Bertels, W. Najjar, A. van Genderen, & S. Vassiliadis (Eds.), International Conference on Field Programmable Logic and Applications, FPL 2007 (pp. 74-78). Amsterdam: IEEE. [details] 
  • Murtaza, S., Hoekstra, A. G., & Sloot, P. M. A. (2007). Performance evaluation of FPGA-based Cellular Automata accelerators. In Proceedings of the Third Annual Reconfigurable Systems Summer Institute (RSSI'07) National Center for Supercomputing Applications, Urbana, Illinois: Reconfigurable Systems Summer Institute. [details] 
  • Rycerz, K. J., Bubak, M. T., Malawski, M., & Sloot, P. M. A. (2007). Multiple HLA Federate Processes in Grid Environment. In M. T. Bubak, M. Turala, & K. Wiatr (Eds.), CGW'06 Proceedings (pp. 293-294). Cracow, Poland. [details] 
  • Rycerz, K. J., Tirado Ramos, A., Gualandris, A., Portegies Zwart, S. F., Bubak, M. T., & Sloot, P. M. A. (2007). Interactive N-Body simulations on the Grid: HLA versus MPI. International Journal of High Performance Computing Applications, 21, 210-221. [details] 

2006

  • Abrahamyan, L., Bernsdorf, J. M., Zeiser, T., Lammers, P., Hoekstra, A. G., & Sloot, P. M. A. (2006). MPI parallelization and performance aspects of a graph based LB flow solver. In Proceedings Discrete Simulation of Fluid Dynamics DSFD2006, Geneva, Switserland [details] 
  • Abrahamyan, L., Hoekstra, A. G., & Sloot, P. M. A. (2006). Choosing Optimal L-BGK Simulation Parameters for Time Harmonic Flows. In Proceedings Discrete Simulation of Fluid Dynamics DSFD2006, Geneva, Switserland [details] 
  • Artoli, A. M. M., Hoekstra, A. G., & Sloot, P. M. A. (2006). Mesoscopic simulations of systolic flow in the Human abdominal aorta. Journal of Biomechanics, 39, 873-884. DOI: 10.1016/j.jbiomech.2005.01.033  [details] 
  • Artoli, A. M., Hoekstra, A. G., & Sloot, P. M. A. (2006). Optimizing lattice Boltzmann simulations for unsteady flows. Computers & fluids, 35(2), 227-240. DOI: 10.1016/j.compfluid.2004.12.002  [details] 
  • Krzhizhanovskaya, V. V., Korkhov, V. V., Tirado-Ramos, A., Groen, D. J., Shoshmina, I. V., Valuev, I. A., ... Sloot, P. M. A. (2006). Computational Engineering on the Grid: Crafting a Distributed Virtual Reactor. In E-Science 2006 : Second IEEE International Conference on e-Science and Grid Computing: 4-6 December 2006, Amsterdam, Netherlands [101] Los Alamitos, Calif.: IEEE Computer Society. DOI: 10.1109/E-SCIENCE.2006.261185  [details] 
  • Krzhizhanovskaya, V. V., Korkhov, V., & Sloot, P. M. A. (2006). Virtual Reactor: a distributed computing environment for simulation of plasma chemical processes on heterogeneous resources of the Grid. In All-Russian conference "Scientific services on the Internet: Parallel Programming Technologies" Novorossiysk, Russia. [details] 
  • Krzhizhanovskaya, V. V., Sloot, P. M. A., & Gorbachev, Y. E. (2006). Modeling of Plasma Chemical Deposition and Degradation of Silicon Thin Films. In E. E. Gdoutos (Ed.), Proceedings of the 16th European Conference of Fracture, Alexandroupolis, Greece, July 3-7, 2006 (pp. 1347-1348). Alexandroupolis, Greece: Springer. [details] 
  • Merks, R. M. H., Hoekstra, A. G., Kaandorp, J. A., Sloot, P. M. A., & Hogeweg, P. (2006). Problem-Solving Environments for Biological Morphogenesis. IEEE Computational Science and Engineering, 8, 61-72. [details] 
  • Rycerz, K. J., Bubak, M. T., Malawski, M., & Sloot, P. M. A. (2006). Grid support for HLA-based collaborative environment for vascular reconstruction. In P. M. A. Sloot, G. D. van Albada, M. T. Bubak, & A. Trefethen (Eds.), 2nd IEEE International Conference on e-Science and Grid Computing (pp. 48). IEEE.
  • Scarpa, M., Belleman, R. G., Sloot, P. M. A., & de Laat, C. T. A. M. (2006). Highly interactive distributed visualization. Future Generation Computer Systems, 22(8), 896-900. DOI: 10.1016/j.future.2006.03.004  [details] 
  • Sloot, P. M. A., Altintas, I., Bubak, M. T., Boucher, C., & Tirado Ramos, A. (2006). From Molecule to Man: Decision Support in Individualized E-Health. Computer, 39(11).
  • Sloot, P. M. A., Tirado Ramos, A., Altintas, I., Bubak, M. T., & Boucher, C. A. (2006). From Molecule to Man: Decision Support in Individualized E-Health. Computer, 39, 40-46. [details] 
  • Tirado Ramos, A., & Sloot, P. M. A. (2006). A Conceptual Grid Architecture for Interactive Biomedical Applications. In 19th IEEE International Symposium on Computer-Based Medical Systems (CBMS'06) (pp. 762-767). Salt Lake City, USA: IEEE. [details] 
  • Vrugt, J. A., Ó Nualláin, B. S., Robinson, B. A., Bouten, W., Dekker, S. C., & Sloot, P. M. A. (2006). Application of parallel computing to stochastic parameter estimation in environmental models. Computers & Geosciences, 32, 1139-1155. DOI: 10.1016/j.cageo.2005.10.015  [details] 
  • Rycerz, K. J., Bubak, M. T., Malawski, M., & Sloot, P. M. A. (2006). A Grid Service for Management of Multiple HLA Federate Processes. In R. Wyrzykowski, J. J. Dongarra, N. Meyer, & J. Wasniewski (Eds.), Parallel Processing and Applied Mathematics: 6th International Conference (PPAM) 2005, Revised selected papers (Vol. 3911, pp. 699-706). Springer. [details] 
  • Rycerz, K. J., Bubak, M. T., Sloot, P. M. A., & Getov, V. S. (2006). Problem solving environment for distributed interactive applications. In S. Gorlatch, M. T. Bubak, & T. Priol (Eds.), Integrated Research in Grid Computing, Integration Workshop (pp. 129-140). Krakow, Poland: Academic Computing Centre CYFRONET AGH. [details] 

2005

  • Abrahamyan, L., Schaap, J. A., Hoekstra, A. G., Shamonin, D. P., Box, F. M. A., van der Geest, R. J., ... Sloot, P. M. A. (2005). A Problem Solving Environment for Image-Based Computational Hemodynamics. Lecture Notes in Computer Science, 3514, 287-294. [details] 
  • Hoekstra, A. G., & Sloot, P. M. A. (2005). Introducing Grid Speedup Gamma: A Scalability Metric for Parallel Applications on the Grid. Lecture Notes in Computer Science, 3470, 534-543. [details] 
  • Iskra, K. A., van Albada, G. D., & Sloot, P. M. A. (2005). Towards Grid-Aware Time Warp. Simulation, 81(4), 293-306. DOI: 10.1177/0037549705055015  [details] 
  • Kaandorp, J. A., Sloot, P. M. A., Merks, R. M. H., Bak, R. P. M., Vermeij, M. J. A., & Maier, C. (2005). Morphogenesis of the branching reef coral Madracis mirabilis. Proceedings of the Royal Society B-Biological Sciences, 272, 127-133. DOI: 10.1098/rspb.2004.2934  [details] 
  • Krzhizhanovskaya, V. V., Sloot, P. M. A., & Gorbachev, Y. E. (2005). Grid-based Simulation of Industrial Thin Film Production. In SIMULATION: Transactions of The Society for Modeling and Simulation International (Vol. 81, pp. 77-85) [details] 
  • Rycerz, K., Bubak, M. T., Malawski, M., & Sloot, P. M. A. (2005). HLA Grid based support for simulation of vascular reconstruction. In S. Gorlatch, & M. Danelutto (Eds.), Proceedings of the CoreGRID Workshop "Integrated Research in Grid Computing" (pp. 165-174). University of Pisa, Computer Science Department. [details] 
  • Rycerz, K., Bubak, M., Malawski, M., & Sloot, P. (2005). A Framework for HLA-Based Interactive Simulations on the Grid. Simulation, 81(1), 67-76. DOI: 10.1177/0037549705051970  [details] 
  • Sloot, P. M. A. (2005). Preface. In Future Generation Computer Systems [details] 
  • Sloot, P. M. A., Boucher, C. A., Bubak, M. T., Hoekstra, A. G., Plaszczak, P., Postumus, A., ... Tirado Ramos, A. (2005). VIROLAB - A virtual Laboratory for Decision Support in Viral Diseases Treatment. In Cracow Grid Workshop [details] 
  • Sloot, P. M. A., Boukhanovsky, A. V., Keulen, W., & Boucher, C. A. B. (2005). A Grid-based HIV Expert System. In Proc. 5th International Symposium on Cluster Computing and Grid Cardiff: IEEE. [details] 
  • Sloot, P. M. A., Boukhanovsky, A. V., Keulen, W., Tirado Ramos, A., & Boucher, C. A. B. (2005). A Grid-Based Hiv Expert System. Journal of Clinical Monitoring and Computing, 19(4-5), 263-278. DOI: 10.1007/s10877-005-0673-2  [details] 
  • Tirado Ramos, A., Shamonin, D. P., Shulakov, R., Groen, D. J., Hoekstra, A. G., van Albada, G. D., ... Sloot, P. M. A. (2005). Interactive Problem Solving Environments on the Grid for Image-based Computational Haemodynamics. In The CrossGrid Book European CrossGrid Consortium. [details] 
  • Tirado Ramos, A., Tsouloupas, G., Dikaiakos, M. D., & Sloot, P. M. A. (2005). Grid Resource Selection by Application Benchmarking: a Computational Haemodynamics Case Study. Lecture Notes in Computer Science, 3514, 534-543. [details] 
  • Tirado Ramos, A., Groen, D. J., & Sloot, P. M. A. (2005). Exploring OGSA Interoperability with LCG-based Production Grids for Biomedical Applications. In Cracow Grid Workshop 2005 [details] 
  • Tirado Ramos, A., Groen, D. J., & Sloot, P. M. A. (2005). On-line Application Performance Monitoring of Blood Flow Simulation in Computational Grid Architectures. In Proceedings 18th IEEE Symposium on Computer-Based Medical Systems (pp. 511-516). Dublin. [details] 
  • Voogd, J. M., Sloot, P. M. A., & van Dantzig, R. (2005). Equilibrium spherically curved two-dimensional Lennard-Jones systems. Journal of Chemical Physics, 123(084105), 1-5. [details] 
  • Zhao, Z., Belloum, A. S. Z., Sloot, P. M. A., & Hertzberger, L. O. (2005). Agent Technology and Generic Workflow Management in an e-Science Environment. Lecture Notes in Computer Science, 3795, 480-485. [details] 
  • Zhao, Z., Belloum, A. S. Z., Sloot, P. M. A., & Hertzberger, L. O. (2005). Agent technology and scientific workflow management in an e-Science environment. In Proceedings of the 17th IEEE International conference on Tools with Artificial Intelligence (pp. 19-23). Hongkong: IEEE Computer Society Press. [details] 
  • Zhao, Z., Belloum, A. S. Z., Wibisono, A., Terpstra, F., Boer, P. T., Sloot, P. M. A., & Hertzberger, L. O. (2005). Scientific workflow management: between generality and applicability. In Proceedings of the International Workshop on Grid and Peer-to-Peer based Workflows in conjunction with the 5th International Conference on Quality Software Melbourne: IEEE Computer Society Press. [details] 
  • Zhao, Z., Belloum, A. S. Z., Yakali, H. H., & Sloot, P. M. A. (2005). Dynamic Workflow in a Grid Enabled Problem Solving Environment. In Proceedings of the 5th International Conference on Computer and Information Technology (pp. 339-345). Shanghai: IEEE Computer Society Press. [details] 
  • Zhao, Z., van Albada, D., & Sloot, P. (2005). Agent-based flow control for HLA components. Simulation, 81(7), 487-501. DOI: 10.1177/0037549705058060  [details] 
  • Zhao, Z., van Albada, G. D., & Sloot, P. M. A. (2005). Rapid Prototyping of Complex Interactive Simulation Systems. In Proceedings 10th IEEE International Conference on Engineering of Complex Computer Systems (pp. 366-375). Shanghai: IEEE Computer Society Press. [details] 
  • Zudilova-Seinstra, E. V., & Sloot, P. M. A. (2005). Bringing Combined Interaction to a Problem Solving Environment for Vascular Reconstruction. Future Generation Computer Systems, 21(7), 1167-1176. DOI: 10.1016/j.future.2004.04.004  [details] 
  • Kvaloy, T. A., Rongen, E., Tirado Ramos, A., & Sloot, P. M. A. (2005). Automatic Composition and Selection of Semantic Web Services. Lecture Notes in Computer Science, 3470, 184-192. [details] 

2004

  • Artoli, A. M. M., Kandhai, D., Hoefsloot, H. C. J., Hoekstra, A. G., & Sloot, P. M. A. (2004). Lattice BGK simulations of flow in a symmetric bifurcation. Future Generation Computer Systems, 20(6), 909-916. DOI: 10.1016/j.future.2003.12.002  [details] 
  • Cramer, H. S. M., Evers, V., Zudilova-Seinstra, E. V., & Sloot, P. M. A. (2004). Context analysis to support development of virtual reality applications. Virtual Reality, 7(3-4), 177-186. [details] 
  • Cramer, H. S. M., Evers, V., Zudilova-Seinstra, E. V., & Sloot, P. M. A. (2004). Heuristic evaluation and context analysis to aid the development of a simulated vascular reconstruction system. In Proceedings Virtual Reality Design and Evaluation Workshop Nottingham. [details] 
  • Cramer, H. S. M., Evers, V., Zudilova-Seinstra, E. V., & Sloot, P. M. A. (2004). Usability Evaluation of a Simulated Vascular Reconstruction System. In Proceedings of the VIRART Virtual Reality Design and Evaluation Workshop 2004 University of Nottingham, United Kingdom.
  • Cramer, H. S. M., Evers, V., Zudilova-Seinstra, E. V., & Sloot, P. M. A. (2004). Usability Evaluation of a Simulated Vascular Reconstruction System. In Proceedings of the VIRART Virtual Reality Design and Evaluation Workshop 2004 University of Nottingham. [details] 
  • Hoekstra, A. G., van 't Hoff, J., Artoli, A. M. M., & Sloot, P. M. A. (2004). Unsteady flow in a 2D elastic tube with the LBGK method. Future Generation Computer Systems, 20(6), 917-924. DOI: 10.1016/j.future.2003.12.003  [details] 
  • Iskra, K. A., van Albada, G. D., & Sloot, P. M. A. (2004). Towards Grid-aware Time Warp. In Proceedings of the 18th Workshop on Parallel and Distributed Simulation (pp. 63-70). Kufstein: IEEE Computer Society. [details] 
  • Krzhizhanovskaya, V. V., Gorbachev, Y. E., & Sloot, P. M. A. (2004). A Grid-Based Problem-Solving Environment for Simulation of Plasma Enhanced Chemical Vapor Deposition. In Proceedings of the International conference "Distributed Computing and Grid Technologies in Science and Education" Dubna, Russia. [details] 
  • Krzhizhanovskaya, V. V., Zatevakhin, M. A., Ignatiev, A. A., Gorbachev, Y. E., Goedheer, W. J., & Sloot, P. M. A. (2004). A 3D Virtual Reactor for Simulation of Silicon-Based Film Production. In Proceedings of the 5th International Bi-Annual ASME/JSME Symposium on Computational Technologies forFluid/Thermal/Structural/Chemical Systems with Industrial Applications (Vol. 491-2, pp. 59-68). San Diego. [details] 
  • Leskes, B., & Sloot, P. M. A. (2004). Unlearning Phenomena in Co-evolution of Non-uniform Cellular Automata. Lecture Notes in Computer Science, 3305, 172-181. [details] 
  • Merks, R. M. H., Hoekstra, A. G., Kaandorp, J. A., & Sloot, P. M. A. (2004). Polyp oriented modelling of coral growth. Journal of Theoretical Biology, 228(4), 559-576. DOI: 10.1016/j.jtbi.2004.02.020  [details] 
  • Rycerz, K., Balis, B., Szymacha, R., Bubak, M. T., & Sloot, P. M. A. (2004). Monitoring of HLA Grid Application Federates with OCM-G. In S. J. Turner, D. Roberts, & L. Wilson (Eds.), Proceedings of the Eighth IEEE International Symposium on Distributed Simulation and Real-Time Applications (pp. 125-132). Budapest: IEEE. [details] 
  • Rycerz, K., Bubak, M. T., Malawski, M., & Sloot, P. M. A. (2004). Support for Effective and Fault Tolerant Execution of HLA-Based Applications in the OGSA Framework. Lecture Notes in Computer Science, 3038, 848-855. [details] 
  • Sloot, P. M. A., Tirado Ramos, A., Hoekstra, A. G., & Bubak, M. T. (2004). An Interactive Grid Environment for Non-Invasive Vascular Reconstruction. In Proceedings of the 2nd International Workshop on Biomedical Computations on the Grid Chicago: IEEE. [details] 
  • Spinnato, P. F., van Albada, G. D., & Sloot, P. M. A. (2004). Performance modelling of distributed hybrid architectures. IEEE Transactions on Parallel and Distributed Systems, 15(1), 81-92. DOI: 10.1109/TPDS.2004.1264788  [details] 
  • Tirado Ramos, A., Sloot, P. M. A., Hoekstra, A. G., & Bubak, M. T. (2004). An integrative approach to high-performance biomedical problem solving environments on the Grid. Parallel Computing, 30(9-10), 1037-1055. DOI: 10.1016/j.parco.2004.07.010  [details] 
  • Zudilova-Seinstra, E. V., & Sloot, P. M. A. (2004). Multi-modal Interaction in Biomedicine. Lecture Notes in Computer Science, 3345, 184-201. [details] 
  • Gavidia, D. P., Zudilova-Seinstra, E. V., & Sloot, P. M. A. (2004). A Client-Server Engine for Parallel Computation of High-Resolution Planes. Lecture Notes in Computer Science, 3038, 970-977. [details] 
  • Gorbachev, Y. E., Krzhizhanovskaya, V. V., & Sloot, P. M. A. (2004). Using GRID technologies for simulation of complex physical-chemical systems. In Proceedings of the XI All-Russian conference Telematika'2004 (Vol. 1, pp. 165-167). Moscow: SPbSU ITMO "Informika". [details] 
  • Rycerz, K. J., Bubak, M. T., Malawski, M., & Sloot, P. M. A. (2004). Interactive Grid Computing: Adapting High Level Architecture-based Applications to the Grid. TASK Quarterly, Scientific Bulletin of the Academic Centre of Gdansk, 8, 549-559.
  • Zajac, K., Bubak, M. T., Malawski, M., & Sloot, P. M. A. (2004). Execution and Migration Management of HLA-Based Interactive Simulations on the Grid. Lecture Notes in Computer Science, 3019, 872-879. [details] 

2003

  • Artoli, A. M. M., Hoekstra, A. G., & Sloot, P. M. A. (2003). Simulation of a Systolic Cycle in a Realistic Artery with the Lattice Boltzmann BGK Method. International Journal of Modern Physics C, 17(1 en 2), 95-98. [details] 
  • Artoli, A. M. M., Kandhai, B. D., Hoefsloot, H. C. J., Hoekstra, A. G., & Sloot, P. M. A. (2003). Lattice Boltzmann, a robust and accurate solver for interactive computational hemodynamics. In P. M. A. Sloot, D. Abrahamson, A. V. Bagdanov, J. J. Dongarra, A. Y. Zomaya, & Y. E. Gorbachev (Eds.), Computational Science - ICCS 2003 (Vol. 2657, pp. 1034-1043). Melbourne, Australia and St. Petersburg, Russia: Springer Verlag. [details] 
  • Artoli, A. M., Hoekstra, A. G., & Sloot, P. M. A. (2003). Accelerated lattice BGK method for unsteady simulations through Mach number annealing. International Journal of Modern Physics C, 14(6), 835-847. DOI: 10.1142/S012918310300498X  [details] 
  • Hoekstra, A. G., van 't Hoff, J., Artoli, A. M. M., & Sloot, P. M. A. (2003). Lattice BGK Simulations of Unsteady Flow in a 2D Elastic Tube. In P. M. A. Sloot, D. Abrahamson, A. V. Bogdanov, J. J. Dongarra, A. Y. Zomaya, & Y. E. Gorbachev (Eds.), Computational Science - ICCS 2003 (Vol. 2657, pp. 997-1006). Melbourne, Australia and St. Petersburg, Russia: Springer Verlag. [details] 
  • Iskra, K. A., van Albada, G. D., & Sloot, P. M. A. (2003). Time Warp Cancellation Optmisations on High Latency Networks. In S. J. Turner, & S. J. E. Taylor (Eds.), Proceedings Seventh IEEE International Symposium on Distributed Simulation and Real Time Applications (DS-RT 2003) (pp. 128-135). Delft, The Netherlands: IEEE Computer Society. [details] 
  • Kaandorp, J. A., Koopman, E. A., Sloot, P. M. A., Bak, R. P. M., Vermeij, M. J. A., & Lampmann, L. E. H. (2003). Simulation and analysis of flow patterns around the scleractinian coral Madracis mirabilis (Duchassaing and Michelotti). Philosophical Transactions of the Royal Society B - Biological Sciences, 358(1437), 1551-1557. DOI: 10.1098/rstb.2003.1339  [details] 
  • Merks, R. M. H., Hoekstra, A. G., Kaandorp, J. A., & Sloot, P. M. A. (2003). Branching and compactification in a model of coral growth: a critical reinvestigation of the effect of hydrodynamics. In V. Capasso (Ed.), Mathematical modelling & Computing in Biology and Medicine; 5th ESMTB Conference 2002 (pp. 539-544). MIRIAM (Milan Res. C. for Industr. and Applied Math). [details] 
  • Merks, R. M. H., Hoekstra, A. G., Kaandorp, J. A., & Sloot, P. M. A. (2003). Diffusion Limited Growth In Laminar Flows. International Journal of Modern Physics C, 14, 1171-1182. DOI: 10.1142/S0129183103005297 
  • Merks, R. M. H., Hoekstra, A. G., Kaandorp, J. A., & Sloot, P. M. A. (2003). Models of coral growth: Spontaneous branching, compactification and the Laplacian growth assumption. Journal of Theoretical Biology, 224(2), 153-166. DOI: 10.1016/S0022-5193(03)00140-1  [details] 
  • Merks, R. M. H., Hoekstra, A. G., Kaandorp, J. A., & Sloot, P. M. A. (2003). Problem Solving Environment for Modelling Stony Coral Morphogenesis. In P. M. A. Sloot, D. Abrahamson, A. V. Bogdanov, J. J. Dongarra, A. Y. Zomaya, & Y. E. Gorbachev (Eds.), Computational Science - ICCS 2003 (Vol. 2657, pp. 639-648). Melbourne, Australia: Springer Verlag. [details] 
  • Sloot, P. M. A., Boucher, C. A. B., Kiryukhin, I., Saskov, K., & Boukhanovsky, A. V. (2003). A grid-based problem-solving environment for biomedicine. In S. Norager (Ed.), Proceedings of the First European HealthGrid Conference (pp. 300-323). Brussels, Belgium: Commission of the European Communities, Inf. Soc. Dir-Gen.. [details] 
  • Sloot, P. M. A., van Albada, G. D., & Zudilova-Seinstra, E. V. (2003). Grid-based Interactive Visualisation of Medical Images. In S. Norager (Ed.), Proceedings of the First European HealthGrid Conference (pp. 57-66). Brussels, Belgium: Commission of the European Communities, Inf. Soc. Dir-Gen.. [details] 
  • Tirado Ramos, A., Zajac, K., Zhao, Z., Sloot, P. M. A., van Albada, G. D., & Bubak, M. T. (2003). Experimental Grid Access for Dynamic Discovery and Data Transfer in Distributed Interactive Simulation Systems. In P. M. A. Sloot, D. Abrahamson, A. V. Bogdanov, J. J. Dongarra, A. Y. Zomaya, & Y. E. Gorbachev (Eds.), Computational Science - ICCS 2003, Proceedings Part I (Vol. 2657, pp. 284-292). Heidelberg: Springer Verlag. [details] 
  • Zhao, Z., van Albada, G. D., & Sloot, P. M. A. (2003). Interaction scenario: orchestrating agents in a multi-agent system. In J-P. Muller, & M-M. Seidel (Eds.), Proceedings of the 4th workshop on agent-based simulation (pp. 155-160). Montpellier, France. [details] 
  • Zhao, Z., van Albada, G. D., Tirado Ramos, A., Zajac, K., & Sloot, P. M. A. (2003). ISS-Studio: a prototype for a user-friendly tool for designing interactive experiments in Problem Solving Environments. In P. M. A. Sloot, D. Abrahamson, A. V. Bogdanov, J. J. Dongarra, A. Y. Zomaya, & Y. E. Gorbachev (Eds.), Computational Science - ICCS 2003, Proceedings Part I (Vol. 2657, pp. 679-688). Melbourne, Australia and St. Petersburg, Russia: Springer Verlag. [details] 
  • Zudilova-Seinstra, E. V., & Sloot, P. M. A. (2003). Virtual Reality and Desktop as a Combined Interaction-Visualisation Medium for a Problem-Solving Environment. In P. M. A. Sloot, D. Abrahamson, A. V. Bogdanov, J. J. Dongarra, A. Y. Zomaya, & Y. E. Gorbachev (Eds.), Computational Science - ICCS 2003, Proceedings Part III (Vol. 2659, pp. 1025-1034). Springer Verlag. [details] 
  • Kiryukhin, I., Saskov, K., Boukhanovsky, A. V., Keulen, W., Boucher, C. A. B., & Sloot, P. M. A. (2003). Stochastic Modeling of Temporal Variabilitiy of HIV-1 Population. In P. M. A. Sloot, D. Abrahamson, A. V. Bogdanov, J. J. Dongarra, A. Y. Zomaya, & Y. E. Gorbachev (Eds.), Computational Science-ICCS 2003 (Vol. 2657, pp. 125-135). Melbourne, Australia and St. Petersburg, Russia: Springer Verlag. [details] 
  • Zajac, K., Bubak, M. T., Malawski, M., & Sloot, P. M. A. (2003). Towards a Grid Management System for HLA-Based Interactive Simulations. In S. J. Turner, & S. J. E. Taylor (Eds.), Proceedings Seventh IEEE International Symposium on Distributed Simulation and Real Time Applications (pp. 4-11). Delft, The Netherlands: IEEE Computer Society. [details] 
  • Zajac, K., Tirado Ramos, A., Zhao, Z., Sloot, P. M. A., & Bubak, M. T. (2003). Grid Services for HLA-based Distributed Simulation Frameworks. In First European Across Grids Conference, Santiago de Compostela, Spain Heidelberg: Springer Verlag. [details] 

2002

  • Afsarmanesh, H., Belleman, R. G., Belloum, A. S. Z., Benabdelkader, A., van den Brand, J. F. J., Eijkel, G. B., ... Yakali, H. H. (2002). VLAM-G: A Grid-based virtual laboratory. Scientific Programming, 10(2), 173-181. [details] 
  • Artoli, A. M. M., Hoekstra, A. G., & Sloot, P. M. A. (2002). 3D Pulsatile flow with the Lattice Boltzmann BGK Method. International Journal of Modern Physics C, 13(8), 1119-1134. DOI: 10.1142/S0129183102003826  [details] 
  • Artoli, A. M. M., Hoekstra, A. G., & Sloot, P. M. A. (2002). Accuracy of 2D pulsatile flow in the lattice Boltzmann BGK method. In P. M. A. Sloot, C. J. K. Tan, J. J. Dongarra, & A. G. Hoekstra (Eds.), LNCS; Computational Science - ICCS 2002, Proceedings Part I (Vol. 2329, pp. 361-370). Springer Verlag. [details] 
  • Belleman, R. G., & Sloot, P. M. A. (2002). Dynamic Exploration Environments. In J. Meij (Ed.), Dealing with the data flood (mining data, text and multimedia (pp. 771-787). The Hague: STT/Beweton. [details] 
  • Bubak, M. T., Zbik, D., van Albada, G. D., Iskra, K. A., & Sloot, P. M. A. (2002). Portable Library of Migratable Sockets. Scientific Programming, 9, 211-222. [details] 
  • Iskra, K. A., Belleman, R. G., van Albada, G. D., Santoso, J., Sloot, P. M. A., Bal, H. E., ... Bubak, M. T. (2002). The Polder Computing Environment, a system for interactive distributed simulation. Concurrency and Computation: Practice and Experience, 14, 1313-1335. DOI: 10.1002/cpe.692  [details] 
  • Iskra, K. A., van Albada, G. D., & Sloot, P. M. A. (2002). Rollbacks in Time Warp - Analysis and Modelling. In E. F. Deprettere, A. S. Z. Belloum, J. W. J. Heijnsdijk, & F. van der Stappen (Eds.), ASCI 2002, Proceedings of the eighth annual conference of the Advanced School for Computing and Imaging (pp. 88-94). Delft: ASCI. [details] 
  • Kandhai, B. D., Tallarek, U., Hlushkou, D., Hoekstra, A. G., Sloot, P. M. A., & van As, H. (2002). Numerical simulation and measurement of liquid hold-up in biporous media containing discrete stagnant zones. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences, 360, 521-534. DOI: 10.1098/rsta.2001.0952 
  • Kandhai, B. D., Hlushkou, D., Hoekstra, A. G., Sloot, P. M. A., van As, H., & Tallarek, U. (2002). Influence of Stagnant Zones on Transient and Asymptotic Dispersion in Macroscopically Homogeneous Porous Media. Physical Review Letters, 88(23), 1-4. [details] 
  • Krzhizhanovskaya, V. V., Zatevakhin, M. A., Ignatiev, A. A., Gorbachev, Y. E., & Sloot, P. M. A. (2002). Distributed Simulation of Silicon-Based Film Growth. In R. Wyrzykowski, J. Dongarra, M. Paprzycki, & J. Wasniewski (Eds.), Parallel Processing and Applied Mathematics, 4th International Conference, PPAM 2001, Naleczow, Poland (pp. 879-887). Berlin-Heidelberg: Springer. DOI: 10.1007/3-540-48086-2  [details] 
  • Merks, R. M. H., Hoekstra, A. G., & Sloot, P. M. A. (2002). The moment propagation method for advection-diffusion in the lattice Boltzmann method: validation and Péclet number limits. Journal of computational Physics, 183, 563-576. DOI: 10.1006/jcph.2002.7209  [details] 
  • Merks, R. M. H., Hoekstra, A. G., Kaandorp, J. A., & Sloot, P. M. A. (2002). Spontaneous branching in a polyp oriented model of stony coral growth. In P. M. A. Sloot, C. J. K. Tan, J. J. Dongarra, & A. G. Hoekstra (Eds.), Computational Science- ICCS 2002, Proceedings Part I (Vol. 2329, pp. 88-96). Springer Verlag. [details] 
  • Overeinder, B. J., Schoneveld, A., & Sloot, P. M. A. (2002). Self-Organized Criticality in Optimistic Simulation of Correlated Systems. Parallel and Distributed Computing Practices, 4(1), 61-75. [details] 
  • Santoso, J., van Albada, G. D., Basaruddin, T., & Sloot, P. M. A. (2002). A Simulation Environment for Job Scheduling on Distributed Systems. In P. M. A. Sloot, C. J. K. Tan, J. J. Dongarra, & A. G. Hoekstra (Eds.), Computational Science - ICCS 2002, Proceedings Part I (Vol. 2329, pp. 653-662). Springer Verlag. [details] 
  • Sloot, P. M. A., Tan, C. J. K., Dongarra, J. J., & Hoekstra, A. G. (2002). Computational Science - ICCS 2002, Proceedings Part II. In Lecture Notes in Computer Science (Vol. 2330). Springer Verlag. [details] 
  • Sloot, P. M. A., Tan, C. J. K., Dongarra, J. J., & Hoekstra, A. G. (2002). Computational Science - ICCS 2002, Proceedings Part III. In Lecture Notes in Computer Science (Vol. 2331). Springer Verlag. [details] 
  • Sloot, P. M. A., Chen, F., & Boucher, C. A. B. (2002). Cellular Automata Model of Drug Therapy for HIV Infection. In S. Bandini, B. Chopard, & M. Tomassini (Eds.), 5th International Conference on Cellular Automata for Research and Industry, ACRI 2002 (Vol. 2493, pp. 282-293) [details] 
  • Spinnato, P. F., Portegies Zwart, S. F., Fellhauer, M., van Albada, G. D., & Sloot, P. M. A. (2002). Tools and techniques for N-body Simulations. In R. Capuzzo Dolcetta (Ed.), Proceedings of the 1st workshop on Computational Astrophysics in Italy SAIt. [details] 
  • Spinnato, P. F., van Albada, G. D., & Sloot, P. M. A. (2002). A Versatile Simulation Model for Hiërarchical Treecodes. In P. M. A. Sloot, C. J. K. Tan, J. J. Dongarra, A. G. Hoekstra, & G. D. Albada (Eds.), Computational Science - ICCS 2002, Proceedings Part I (Vol. 2329, pp. 176-185). Springer Verlag. [details] 
  • Spinnato, P. F., van Albada, G. D., & Sloot, P. M. A. (2002). Performance Modelling of Hiërarchical N-body Codes Running on Hybrid Architectures. In E. F. Deprettere, A. S. Z. Belloum, J. W. J. Heijnsdijk, & V. D. F. Stappen (Eds.), ASCI 2002, Proceedings of the eight annual conference of the Advanced School for Computing and Imaging (pp. 211-218). Delft: ASCI. [details] 
  • Zhao, Z., Belleman, R. G., van Albada, G. D., & Sloot, P. M. A. (2002). AG-IVE: an Agent based solution to constructing Interactive Simulation Systems. In P. M. A. Sloot, C. J. K. Tan, J. J. Dongarra, & A. G. Hoekstra (Eds.), Computational Science - ICCS 2002, Proceedings Part I (Vol. 2329, pp. 693-703). Springer Verlag. [details] 
  • Zhao, Z., Belleman, R. G., van Albada, G. D., & Sloot, P. M. A. (2002). Reusability and Efficiency in Constructing Interactive Simulation Systems. In E. F. Deprettere, A. S. Z. Belloum, J. W. J. Heijnsdijk, & F. van der Stappen (Eds.), ASCI 2002, Proceedings of the eighth annual conference of the Advanced School for Computing and Imaging (pp. 268-275). Delft: ASCI. [details] 
  • Zhao, Z., Belleman, R. G., van Albada, G. D., & Sloot, P. M. A. (2002). Scenario Switches and State Updates in an Agent-based Solution to Constructing Interactive Simulation Systems. In Proceedings of the Communication Networks and Distributed Systems Modeling and Simulation Conference (CNDS 2002) (pp. 3-10) [details] 
  • Zudilova-Seinstra, E. V., & Sloot, P. M. A. (2002). A First Step to a User-Centered Approach to a Development of Adaptive Simulation-Visualization Complexes. In Proc. of the International Conference of the Systemics, Cybernetics and Informatics (pp. 104-110). Orlando, Florida, USA.
  • Zudilova-Seinstra, E. V., Sloot, P. M. A., & Belleman, R. G. (2002). A Multi-modal Interface for an Interactive Simulated Vascular Reconstruction System. In Fourth IEEE ACMI'02 International Conference on Multimodal Interfaces, Pittsburgh, Pennsylvania (pp. 313-318). Los Alamitos, California, USA: IEEE Computer Society. [details] 
  • Ghulghazaryan, R. G., Ananikian, N. S., & Sloot, P. M. A. (2002). Yang-Lee zeros of the Q-state Potts model on recursive lattices. Physical Review E, 66, 1-9.
  • Zajac, K. J., Bubak, M. T., Malawski, M., Sloot, P. M. A., & Tirado Ramos, A. (2002). A Proposal of Services For Managing Interactive Grid Applications. In M. T. Bubak, M. Noga, & M. Turala (Eds.), Second Cracow Grid Workshop (pp. 155-163). Cracow, Poland: ACC Cyfronet UMM.

2001

  • Artoli, A. M. M., Hoekstra, A. G., & Sloot, P. M. A. (2001). Time dependent flow in a rigid tube using the Lattice Boltzmann Method. In J. P. Boonand, P. V. Coveney, & S. Succi (Eds.), International Conference on Discrete Simulation of Fluid Dynamics in series Europhysics Conference Abstracts (Vol. 25H, pp. 3) [details] 
  • Artoli, A. M. M., Kandhai, B. D., Hoefsloot, H. G., Hoekstra, A. G., & Sloot, P. M. A. (2001). Shear Stress in Lattice Boltzmann Simulations. In F. Hossfeld, & K. Binder (Eds.), Europhysics Conference on Computational Physics in series Publication Series of the John von Neumann Institute for computing (Vol. 8, pp. A127) [details] 
  • Belleman, R. G., & Sloot, P. M. A. (2001). Simulated vascular reconstruction in a virtual operating theatre. In H. U. Lemke, K. Inamura, A. G. Farman, M. W. Vannier, & K. Doi (Eds.), Computer Assisted Radiology and Surgery (Excerpta Medica, International Congress Series 1230) (pp. 938-944). Berlin, Germany: Elsevier Science B.V.. [details] 
  • Bubak, M. T., Zbik, D., van Albada, G. D., Iskra, K. A., & Sloot, P. M. A. (2001). Migratable Sockets for Dynamic Load Balancing. In L. O. Hertzberger, A. G. Hoekstra, & R. D. Williams (Eds.), Proceedings High Performance Computing and Networking (HPCN Europe 2001) in series LNCS volume 2110 (pp. 23-31). Amsterdam, The Netherlands: Springer Verlag. [details] 
  • Hoekstra, A. G., & Sloot, P. M. A. (2001). Wall effects on density fluctuations in the GBL thermal lattice gas automaton. Computer Physics Communications, 142(1-3), 151-154. DOI: 10.1016/S0010-4655(01)00356-3  [details] 
  • Hoekstra, A. G., Frijlink, M. O., Waters, L. B. F. M., & Sloot, P. M. A. (2001). Radiation forces in the discrete-dipole approximation. Journal of the Optical Society of America. A, Optics, Image Science and Vision, 18(8), 1944-1953. DOI: 10.1364/JOSAA.18.001944 
  • Kaandorp, J. A., & Sloot, P. M. A. (2001). Morphological Models of Radiate Accretive Growth and the Influence of Hydrodynamics. Journal of Theoretical Biology, 209(3), 257-274. DOI: 10.1006/jtbi.2001.2261  [details] 
  • Kandhai, B. D., Koponen, A., Hoekstra, A. G., & Sloot, P. M. A. (2001). Iterative momentum relaxation for fast lattice-Boltzmann Simulations. Future Generation Computer Systems, 18(1), 89-96. DOI: 10.1016/S0167-739X(00)00078-9  [details] 
  • Merks, R. M. H., Hoekstra, A. G., & Sloot, P. M. A. (2001). Validation of the Lowe-Frenkel tracer dispersion method in the lattice Boltzmann method. In F. Hossfeld, & K. Binder (Eds.), Europhysics Conference on Computational Physics, in series Publication series of the John von Neumann Institute for Computing (Vol. 8, pp. A140). Aachen, Germany. [details] 
  • Merks, R. M. H., Hoekstra, A. G., & Sloot, P. M. A. (2001). Validation of the Lowe-Frenkel tracer dispersion method in the lattice Botzmann method. In R. L. Lagendijk, J. W. J. Heijnsdijk, A. D. Pimentel, & M. H. F. Wilkinson (Eds.), Proceedings of the 7th annual conference of the Advanced School for Computing and Imaging (pp. 137-141). ASCI. [details] 
  • Overeinder, B. J., Schoneveld, A., & Sloot, P. M. A. (2001). Spatio-Temporal Correlations and Rollback Distributions in Optimistic Simulations. In Proceedings of the 15th Workshop on Parallel and Distributed Simulation (pp. 145-152). Lake Arrowhead, CA: IEEE Computer Society.
  • Overeinder, B. J., Schoneveld, A., & Sloot, P. M. A. (2001). Spatio-Temporal Correlations and Rollback Distributions in Optimistic Simulations. In R. L. Lagendijk, J. W. J. Heijnsdijk, A. D. Pimentel, & M. H. F. Wilkinson (Eds.), Proceedings of the 7th annual conference of the Advanced School for Computing and Imaging (pp. 391-398). ASCI. [details] 
  • Overeinder, B. J., Schoneveld, A., & Sloot, P. M. A. (2001). Spatio-Temporoal Correlations and Rollback Distributions in Optimistic Simulations. In Proceedings of the 15th Workshop on Parllel and Distributed Simulation Lake Arrowhead, CA: IEEE Computer Society.
  • Sloot, P. M. A., & Chopard, B. (2001). Modeling Fluid Flow using Lattice Gases and the Lattice Boltzmann Model. In J. A. Kaandorp, & J. E. K"ubler (Eds.), The algorithmic beauty of seaweeds, sponges and corals (pp. 99-108). Heidelberg, New York: Springer-Verlag.
  • Sloot, P. M. A., & Hoekstra, A. G. (2001). Cellular Automata as a Mesoscopic Approach to Model and simulate Complex Systems. In V. N. Alexandrov, J. J. Dongarra, B. A. Juliano, R. S. Renner, & C. J. K. Tan (Eds.), Proceedings of the 2001 International Conference on Computational Science ICCS 2001, in series LNCS volume 2074 (II) (Vol. LNCS 2074, pp. 518-527). Heidelberg, New York: Springer Verlag. [details] 
  • Sloot, P. M. A., Kaandorp, J. A., Hoekstra, A. G., & Overeinder, B. J. (2001). Distributed Cellular Automata: Large Scale Simulation of Natural Phenomena. In A. Zomaya, F. Ercal, & S. Olariu (Eds.), Solutions to Parallel and Distributed Computing Problems: Lessons from Biological Sciences (pp. 1-46). Computer Centre University of Tromso. [details] 
  • Sloot, P. M. A., Overeinder, B. J., & Schoneveld, A. (2001). Self-organized criticality in simulated correlated systems. Computer Physics Communications, 142, 76-81. DOI: 10.1016/S0010-4655(01)00325-3  [details] 
  • Sloot, P. M. A., Spinnato, P. F., & van Albada, G. D. (2001). N-body Simulation on Hybrid Architectures. In V. N. Alexandrov, J. J. Dongarra, B. A. Juliano, R. S. Renner, & C. J. K. Tan (Eds.), Proceedings of the 2001 International Conference on Computational Science ICCS 2001, in series LNCS volume 2074 (II) (Vol. LNCS 2074, pp. 883-892). Springer Verlag. [details] 
  • Spinnato, P. F., van Albada, G. D., & Sloot, P. M. A. (2001). A Simulator for Parallel Hybrid Computer Systems. In R. L. Lagendijk, J. W. J. Heijnsdijk, A. D. Pimentel, & M. H. F. Wilkinson (Eds.), Proceedings of the 7th annual conference of the Advanced School for Computing and Imaging (pp. 210-219). ASCI. [details] 
  • Spinnato, P. F., van Albada, G. D., & Sloot, P. M. A. (2001). Performance of N-body Codes on Hybrid Machines. Future Generation Computer Systems, 17, 951-959. DOI: 10.1016/S0167-739X(01)00037-1  [details] 
  • Spinnato, P. F., van Albada, G. D., & Sloot, P. M. A. (2001). Performance prediction of N-body simulations on a hybrid architecture. Computer Physics Communications, 139, 34-44. DOI: 10.1016/S0010-4655(01)00225-9  [details] 
  • Weerts, A. H., Kandhai, B. D., Bouten, W., & Sloot, P. M. A. (2001). Gas diffusion coefficients and bulk electrical conductivity of an unsaturated sandy soil: comparing measurements with analogy-based models and lattice Boltzmann simulations. Soil Science Society of America Journal, 65, 1577-1584. DOI: 10.2136/sssaj2001.1577  [details] 
  • Weerts, A. H., Kandhai, B. D., Bouten, W., & Sloot, P. M. A. (2001). Tortuosity of an Unsaturated Sandy Soil Estimated using Gas diffusion and Bulk Soil Electrical Conductivity: Comparing analogy-based Models and Lattice-Boltzmann Simulatons. Soil Science Society of America Journal, 65(6), 1577-1584. DOI: 10.2136/sssaj2001.1577  [details] 
  • Zhao, Z., Belleman, R. G., van Albada, G. D., & Sloot, P. M. A. (2001). System integration for interactive simulation systems using intelligent agents. In R. L. Lagendijk, J. W. J. Heijnsdijk, A. D. Pimentel, & M. H. F. Wilkinson (Eds.), Proceedings of the 7th annual conference of the Advanced School for Computing and Imaging (pp. 399-406). ASCI. [details] 

2000

  • Belleman, R. G., & Sloot, P. M. A. (2000). The Design of Dynamic Exploration Environments for Computational Steering Simulations. In M. Bubak, J. Moscinski, & M. Noga (Eds.), Proceedings of the SGI Users' Conference 2000 (pp. 57-74). Krakow, Poland: Academic Computer Centre CYFRONET AGH. [details] 
  • Belleman, R. G., Zhao, Z., van Albada, G. D., & Sloot, P. M. A. (2000). Design considerations for the construction of immersive dynamic exploration environments. In L. J. V. Vliet, J. W. J. Heijnsdijk, T. Kielman, & P. M. W. Knijnenburg (Eds.), ASCI 2000, Proceedings of the sixth annual conference of the Advanced School for Computing and Imaging (pp. 195-201). Delft: ASCI. [details] 
  • Blaak, R., & Sloot, P. M. A. (2000). Lattice dependence of reaction-diffusion in lattice Boltzmann modelling. Computer Physics Communications, 129, 256-266. DOI: 10.1016/S0010-4655(00)00112-0  [details] 
  • Bubak, M. T., Zbik, D., van Albada, G. D., Iskra, K. A., & Sloot, P. M. A. (2000). Portable Library of Migratable Sockets. In M. Bubak, J. Moscinski, & M. Noga (Eds.), Proceedings of the SGI Users' Conference 2000 (pp. 175-184). Krakow, Poland: Academic Computer Centre CYFRONET AGH. [details] 
  • Bubak, M. T., Funika, W., Zbik, D., van Albada, G. D., Iskra, K. A., Sloot, P. M. A., ... Sowa-Pieklo, K. (2000). Performance Measurement, Debugging and Load Balancing for Metacomputing. In ISThmus 2000, Research and Development for the Information Society, Conference Proceedings (pp. 409-418). Poznan: Instytut Informatyki, Politechnika Poznanska. [details] 
  • Dubbeldam, D., Hoekstra, A. G., & Sloot, P. M. A. (2000). Dynamic Structure Factor in Single and Two-Species Thermal GBL Lattice Gas. Computer Physics Communications, 129, 13-20. DOI: 10.1016/S0010-4655(00)00088-6  [details] 
  • Hoekstra, A. G., Frijlink, M. O., & Sloot, P. M. A. (2000). Calculation of the radiation forces on each dipole in the discrete dipole approximation. In G. Videen, Q. Fu, & P. Chylek (Eds.), Light Scattering by Nonspherical Particles: Halifax Contributions (pp. 237-240). Adelphi, USA: Army Research Laboratory. [details] 
  • Iskra, K. A., Hendrikse, Z. W., van Albada, G. D., Overeinder, B. J., & Sloot, P. M. A. (2000). Dynamic Migration of PVM Tasks. In L. J. V. Vliet, J. W. J. Heijnsdijk, T. Kielman, & P. M. W. Knijnenburg (Eds.), ASCI 2000, Proceedings of the sixth annual conference of the Advanced School for Computing and Imaging (pp. 206-212). Delft: ASCI. [details] 
  • Iskra, K. A., Hendrikse, Z. W., van Albada, G. D., Overeinder, B. J., & Sloot, P. M. A. (2000). Experiments with Migration of PVM Tasks. In ISThmus 2000, Research and Development for the Information Society, Conference Proceedings (pp. 295-304). Poznan: Instytut Informatyki, Politechnika Poznanska. [details] 
  • Iskra, K. A., Hendrikse, Z. W., van Albada, G. D., Overeinder, B. J., & Sloot, P. M. A. (2000). Performance Measurements on Dynamite/DPVM. In J. Dongarra, P. Kacsuk, & N. Podhorszki (Eds.), Recent Advances in PVM and MPI - 7th European PVM/MPI User's Group Meeting, in series LNCS volume 1908 (pp. 27-38). Springer Verlag. [details] 
  • Iskra, K. A., Hendrikse, Z. W., van Albada, G. D., Overeinder, B. J., Sloot, P. M. A., & Gehring, J. (2000). Experiments with migration of message passing tasks. In R. Buyya, & M. Baker (Eds.), Grid Computing--Grid 2000: The first IEEE/ACM International Workshop in volume 1971 van LNCS (Vol. LNCS 1971, pp. 203-213). Springer Verlag. [details] 
  • Kandhai, B. D., Soll, W., Chen, S., Hoekstra, A. G., & Sloot, P. M. A. (2000). Finite-Difference Lattice-BGK Methods on Nested Grids. Computer Physics Communications, 129, 100-109. DOI: 10.1016/S0010-4655(00)00097-7  [details] 
  • Santoso, J., van Albada, G. D., Nazief, B. A. A., & Sloot, P. M. A. (2000). Hiërarchical Job Scheduling for Clusters of Workstations. In L. J. Vliet, J. W. J. Heijnsdijk, T. Kielmann, & P. M. W. Knijnenburg (Eds.), ASCI 2000, Proceedings of the sixth annual conference of the Advanced School for Computing and Imaging (pp. 99-105). Delft: ASCI. [details] 
  • Santoso, J., van Albada, G. D., Nazief, B. A. A., & Sloot, P. M. A. (2000). Simulating Job Scheduling for Clusters of Workstations. In M. Bubak, H. Afsarmanesh, R. D. Williams, & L. O. Hertzberger (Eds.), Proceedings of the HPCN 2000 Conference, in LNCS volume 1823 (Vol. LNCS 1823, pp. 395-406). Amsterdam, The Netherlands: Springer Verlag. [details] 
  • Santoso, J., van Albada, G. D., Sloot, P. M. A., & Nazief, B. A. A. (2000). Simulation of Hiërarchical Resource Management for Meta-computing Systems. International Journal of Foundations of Computer Science, 12(5), 629-643. [details] 
  • Schoneveld, A., Sloot, P. M. A., Lees, M., & Karyadi, E. (2000). A Framework for Dynamic Load Balancing: A Case Study on Explosive Containment Simulation. Parallel Computing, 26, 737-751. DOI: 10.1016/S0167-8191(00)00011-9  [details] 
  • Sloot, P. M. A., Kaandorp, J. A., Hoekstra, A. G., & Overeinder, B. J. (2000). Distributed Cellular Automata: Large Scale Simulation of Natural Phenomena. In A. Zomaya (Ed.), Bio-inspired Computation Wiley. [details] 
  • Spinnato, P. F., van Albada, G. D., & Sloot, P. M. A. (2000). Performance Analysis of Parallel N-Body Codes. In M. Bubak, H. Afsarmanesh, R. D. Williams, & L. O. Hertzberger (Eds.), Proceedings of the HPCN 2000 Conference, in LNCS volume 1823 (Vol. LNCS 1823, pp. 249-260). Amsterdam: Springer Verlag. [details] 
  • Spinnato, P. F., van Albada, G. D., & Sloot, P. M. A. (2000). Performance Analysis of Parallel N-body Codes. In L. J. Vliet, J. W. J. Heijnsdijk, T. Kielmann, & P. M. W. Knijnenburg (Eds.), ASCI 2000, Proceedings of the sixth annual conference of the advanced School for Computing and Imaging (pp. 213-220). Delft: ASCI. [details] 
  • Spinnato, P. F., van Albada, G. D., & Sloot, P. M. A. (2000). Performance Modelling of Hybrid Architectures. Computer Physics Communications. [details] 
  • Spinnato, P. F., van Albada, G. D., & Sloot, P. M. A. (2000). Performance Modelling of Hybrid Architectures. In U. Barberis (Ed.), SIMAI 2000, Sommari--Abstracts (pp. 73-74). Rome: Societa Italiana di Matematica Applicata e Industriale.
  • Bal, H., Bhoedjang, R., Hofman, R., Jacobs, C., Kielmann, T., Maassen, J., ... van der Steen, A. (2000). The Distributed ASCI supercomputer project. Operating Systems Review, 34(4), 76-96. DOI: 10.1145/506106.506115  [details] 
  • Claque, D. S., Kandhai, B. D., Zhang, R., & Sloot, P. M. A. (2000). On the Hydraulic Permeability of (Un)Bounded Fibrous Media Using the Lattice-Boltzmann Method. Physical Review E, 61(1), 616-625. DOI: 10.1103/PhysRevE.61.616  [details] 

1999

  • Belleman, R. G., Kaandorp, J. A., Dijkman, D., & Sloot, P. M. A. (1999). Geoprove: Geometric probes for virtual environments. In J. A. Kaandorp, M. Boasson, J. F. M. Tonino, & M. G. Vosselman (Eds.), Proceedings of the fifth annual conference of the Advanced School for Computing and Imaging ASCI, June 15-17, 1999 (Vol. June 1999, pp. 38-43). Delft: ASCI. [details] 
  • Belleman, R. G., Kaandorp, J. A., Sloot, P. M. A., & Dijkman, D. (1999). Geoprove: Geometric probes for virtual environments. Lecture Notes in Computer Science, 1593, 817-827. [details] 
  • Bergman, M., van Albada, G. D., Simon, H., Buchner, H., Sloot, P. M. A., & Friedrich, V. (1999). Brain activity and parallel computing. In J. A. Kaandorp, M. Boasson, J. F. M. Tonino, & M. G. Vosselman (Eds.), Proceedings of the fifth annual conference of the Advanced School for Computing and Imaging ASCI, June 15-17, 1999 (pp. 44-45). Delft: ASCI. [details] 
  • Dubbeldam, D., Hoekstra, A. G., & Sloot, P. M. A. (1999). Computational aspects of multispecies lattice-gas automata. Lecture Notes in Computer Science, 1593, 339-349. [details] 
  • Dubbeldam, D., Hoekstra, A. G., & Sloot, P. M. A. (1999). Computational aspects of multispecies lattice-gas automata. In J. Kaandorp, M. Boasson, J. F. M. Tonino, & M. G. Vosselman (Eds.), Proceedings of the fifth annual conference of the Advanced School for Computing and Imaging ASCI, June 15-17, 1999 (Vol. June 1999, pp. 267-273). Delft: ASCI. [details] 
  • Hoekstra, A. G., Frijlink, M. O., de Kanter, D., & Sloot, P. M. A. (1999). Two new applications of large scale dda simulations. In J. L. Rodriguez, F. Obelleiro, & T. Wriedt (Eds.), Proceedings of the 4th Conference on Electromagnetic and light Scattering by Nonspherical Particles:Theory and Applications (pp. 333-334) [details] 
  • Kaandorp, J. A., & Sloot, P. M. A. (1999). Growth and form of sponges and corals in a moving fluid. In M. Gromov, A. Carbone, & P. Pruzinkiewics (Eds.), Pattern Formation in biology, vision and dynamics (pp. 24-41). Singapore: World Scientific Publishing Company. [details] 
  • Kandhai, B. D., Koponen, A., Hoekstra, A. G., & Sloot, P. M. A. (1999). Iterative momentum relaxation for fast lattice-boltzmann simulations. Lecture Notes in Computer Science, 1593, 311-318. [details] 
  • Kandhai, B. D., Koponen, A., Hoekstra, A. G., & Sloot, P. M. A. (1999). Iterative momentum relaxation for fast lattice-boltzmann simulations. In J. A. Kaandorp, M. Boasson, J. F. M. Tonino, & M. G. Vosselman (Eds.), Proceedings of the fifth annual conference of the Advanced School for Computing and Imaging ASCI, June 15-17, 1999 (pp. 274-278). Delft: ASCI. [details] 
  • Kandhai, B. D., Koponen, A., Hoekstra, A. G., Kataja, M., Timonen, J., & Sloot, P. M. A. (1999). Implementation aspects of 3d lattice-bgk: Boundaries, accuracy and a new fast relaxation method. Journal of comparative physiology, 150, 482-501. [details] 
  • Kandhai, B. D., Vidal, D., Hoekstra, A. G., Hoefsloot, H. C. J., Iedema, P., & Sloot, P. M. A. (1999). Lattice-boltzmann and finite element simulations of fluid flow in a SMRX mixer. International Journal for Numerical Methods in Fluids, 31, 1019-1033. DOI: 10.1002/(SICI)1097-0363(19991130)31:6<1019::AID-FLD915>3.3.CO;2-9  [details] 
  • Merks, R. M. H., Kaandorp, J. A., & Sloot, P. M. A. (1999). The interplay of hydrodynamics and genetic regulation in the morphogenesis of sponges and stony corals: pilot studies. In Theory and Mathematics in Biology and Medicine: Abstracts (pp. 345)
  • Overeinder, B. J., & Sloot, P. M. A. (1999). Extensions to time warp parallel simulation for spatial decomposed applications. In R. Cheng, & D. Al-Dabass (Eds.), Proceedings of the Fourth United Kingdom Simulation Society Conference (UKSim 99) (Vol. April 1999, pp. 73). UK: Cambridge. [details] 
  • Schoneveld, A., Lees, M., Karyadi, E., & Sloot, P. M. A. (1999). Dynamic load balancing in parallel finite element simulations. In M. Boasson, J. Kaandorp, J. F. M. Tonino, & M. G. Vosselman (Eds.), Proceedings of the fifth annual conference of the Advanced School for Computing and Imaging ASCI (Vol. June 1999, pp. 429-434). Delft: ASCI. [details] 
  • Sloot, P. M. A. (1999). High performance simulation with cellular automata. In N. Piskunov (Ed.), Proceedings of HiPer'99, Tromso, Norway, june 27-30 1999 (pp. 169-207). Tromso: Computer Centre University of Tromso. [details] 
  • Sloot, P. M. A. (1999). Simulation and Visualisation in Medical Diagnosis: Perspectives and Computational Requirements. In L. Grandinetti, A. Marsh, & T. Kauranne (Eds.), Advanced Infrastructures for Future Healthcare IEEE-EMBS Press. [details] 
  • Sloot, P. M. A., & Overeinder, B. J. (1999). Extensions to time warp parallel simulation for spatially decomposed applications. In J. Kaandorp, M. Boasson, J. F. M. Tonino, & M. G. Vosselman (Eds.), Proceedings of the fifth annual conference of the Advanced School for Computing and Imaging ASCI (Vol. june, pp. 118-124). Delft: ASCI. [details] 
  • Sloot, P. M. A., & Overeinder, B. J. (1999). Time warped automata: Parallel discrete event simulation of asynchronous ca's. In B. Mochnacki, R. Wyrzykowski, H. Piech, & J. Szopa (Eds.), Proceedings of the Third International Conference on Parallel Processing and Applied Mathematics, Kazimierz Dolny, Poland, 14-17 september 1999 (pp. 43-62). Technical University of Czestochowa. [details] 
  • Sloot, P. M. A., Kaandorp, J. A., Hoekstra, A. G., & Overeinder, B. J. (1999). Distributed simulation with cellular automata: Architecture and applications. Lecture Notes in Computer Science, 1725, 203-249. [details] 
  • Spinnato, P. F., van Albada, G. D., & Sloot, P. M. A. (1999). Performance modelling of hybrid parallel systems. In Proceedings of the TUG99 Meeting, Barcelona, Spain, Sept. 1999 [details] 
  • Talia, D., & Sloot, P. M. A. (1999). Cellular automata: Promise and prospects in computational science. Future Generation Computer Systems, 16(2-3,dec.99), v-vii. [details] 
  • van Albada, G. D., Clinckemaillie, J., Emmen, A. H. L., Gehring, J., Heinz, O., van der Linden, F., ... Overeinder, B. J. (1999). Dynamite-blasting obstacles to parallel cluster computing. In J. A. Kaandorp, M. Boasson, J. F. M. Tonino, & M. G. Vosselman (Eds.), Proceedings of the fifth annual conference of the Advanced School for Computing and Imaging ASCI, june 15-17, 1999 (pp. 31-37). Delft: ASCI. [details] 
  • van Albada, G. D., Clinckemaillie, J., Emmen, A. H. L., Gehring, J., Heinz, O., van der Linden, F., ... Sloot, P. M. A. (1999). Dynamite - blasting obstacles to parallel cluster computing. Lecture Notes in Computer Science, 1593, 300-310. [details] 

1998

  • Belleman, R. G., Kaandorp, J. A., & Sloot, P. M. A. (1998). A virtual environment for the exploration of diffusion and flow phenomena in complex geometries. Future Generation Computer Systems, 14(3/4), 209-214. DOI: 10.1016/S0167-739X(98)00024-7  [details] 
  • Belleman, R. G., Kaandorp, J. A., & Sloot, P. M. A. (1998). Interactive environments for the exploration of large data sets. In B. M. ter Haar Romeny, D. H. J. Epema, J. F. M. Tonino, & A. A. Wolters (Eds.), ASCI '98, Proceedings of the fourth annual conference of the Advanced School for Computing and Imaging, Lommel, Belgium, June 9-11, 1998 (pp. 264-268). Advanced School for Computing and Imaging (ASCI). [details] 
  • Buchner, H., Kaiser, S., Sloot, P. M. A., Fuchs, M., & Wassmuth, K. (1998). EEG/MEG Quellen Rekonstruktion- Die functionen von Curry und CAUCHY-par. In V. Metzler, T. Lehmann, K. Spitzer, & T. Tolxdorff (Eds.), Bildverarbeitung fur die Medizin 1998: Algorithmen-Systheme-Anwendungen (pp. 455-459). Springer Verlag GmbH.
  • Hoekstra, A. G., Grimminck, M. D., & Sloot, P. M. A. (1998). Large scale simulations of elastic light scattering by a fast dipole approximation. International Journal of Modern Physics C, 87-102. [details] 
  • Hoekstra, A. G., Rahola, J., & Sloot, P. M. A. (1998). Internal fields in volume integral equation simulations of light scattering: accuracy and resonances. In L. D. Travis, M. I. Mishishenko, & J. W. Hovenier (Eds.), Proceedings of conf. on light scattering by nonspherical particles: theory, measurements and applications (pp. 16-19). American Meteorological Society. [details] 
  • Hoekstra, A. G., & Sloot, P. M. A. (1998). A parallel fast discrete dipole approximation for large scale simulations of elastic light scattering. In D. H. J. Epema, B. M. ter Haar Romeny, J. F. M. Tonino, & A. A. Wolters (Eds.), ASCI '98 Proceedings of the fourth annual conference of the advanced school for computing and imaging (pp. 73-79). ASCI. [details] 
  • Hoekstra, A., Rahola, J., & Sloot, P. (1998). Accuracy of internal fields in volume integral equation simulations of light scattering. Applied Optics, 37(36), 8482-8497. DOI: 10.1364/AO.37.008482  [details] 
  • Kandhai, B. D., Koponen, A., Hoekstra, A. G., Kataja, M., Timonen, J., & Sloot, P. M. A. (1998). Lattice Boltzmann Hydrodynamics on Parallel Systems. Computer Physics Communications, 111, 14-26. DOI: 10.1016/S0010-4655(98)00025-3  [details] 
  • Kandhai, B. D., Dubbeldam, D., Hoekstra, A. G., & Sloot, P. M. A. (1998). Lattice Boltzmann hydrodynamics in centrifugal elutriation chambers. In D. H. J. Epema, B. M. ter Haar Romeny, J. F. M. Tonino, & A. A. Wolters (Eds.), Proc. of the fourth annual conf. of the advanced school for computing and imaging (pp. 91-97) [details] 
  • Kandhai, B. D., Dubbeldam, D., Hoekstra, A. G., & Sloot, P. M. A. (1998). Parallel Lattice-Boltzmann Simulation of fluid flow in centrifugal elutration chambers. In M. Bubak, P. M. A. Sloot, & L. O. Hertzberger (Eds.), high- performance computing and networking (HPCN Europe '98) (pp. 173-182). Springer Verlag GmbH. [details] 
  • Kandhai, B. D., Vidal, D., Hoekstra, A. G., Hoefsloot, H. C. J., Iedema, P., & Sloot, P. M. A. (1998). A comparison between lattice-boltzmann and finite element simulations of fluid flow in static mixer reactors. International Journal of Modern Physics C, 9(8), 1123-1128. DOI: 10.1142/S0129183198001035  [details] 
  • Sloot, P. M. A., Bubak, M. T., & Hertzberger, L. O. (1998). Proceedings high-performance computing and networking (HPCN Europe '98 Amsterdam). In Lecture notes in computer science Springer Verlag GmbH. [details] 
  • Sloot, P. M. A., Pimentel, A. D., & Hertzberger, L. O. (1998). Design issues for high performance simulation. Simulation Practice and Theory, 6(3), 221-242. [details] 
  • van Halderen, A. W., Overeinder, B. J., Sloot, P. M. A., van Dantzig, R., Epema, D. J. H., & Livny, M. (1998). Hierarchical resource management in the polder metacomputing initiative. Parallel Computing, 24(12/13), 1807-1825. [details] 

1997

  • Hoekstra, A. G., Brinkhorst, P. J. H., & Sloot, P. M. A. (1997). First results of dda simulations of elastic light scattering by red blood cells. In J. W. Hovenier, K. Lumme, K. Muinonen, J. Rahola, & H. Laitinen (Eds.), Proceedings Workshop on Light Scattering by Non-Spherical Particles (SCANOP) (pp. 39-40) [details] 
  • Hoekstra, A. G., & Sloot, P. M. A. (1997). Elastic light scattering from single biological cells. In J. A. Kong (Ed.), Progress in Electromagnetics Research Symposium 1997 (pp. 583) [details] 
  • Kaandorp, J. A., & Sloot, P. M. A. (1997). A mesoscopic model for simulating the combined effect of hydrodynamics and diffusion on nutrient driven growth processes. In B. Monien, F. Karsch, & H. Satz (Eds.), Proceedings of the international conference Multi-scale Phenomena and their Simulation conference (pp. 250-254). World Scientific. [details] 
  • Kaandorp, J. A., & Sloot, P. M. A. (1997). Parallel simulation of accretive growth in 3-dimensions. Biosystems, 44(3), 181-192. DOI: 10.1016/S0303-2647(97)00052-X  [details] 
  • Kandhai, B. D., Koponen, A., Hoekstra, A. G., Kataja, M., Timonen, J., & Sloot, P. M. A. (1997). Performance of a parallel 3d lattice boltzmann code for simulating fluid flow. In J. Timonen (Ed.), International Workshop on Physics of Structurally Disordered Materials [details] 
  • Overeinder, B. J., & Sloot, P. M. A. (1997). Breaking the Curse of Dynamics by Task Migration: Pilot Experiments in the Polder Metacomputer. Lecture Notes in Computer Science, 1332, 194-207. [details] 
  • Schoneveld, A., de Ronde, J. F., & Sloot, P. M. A. (1997). On the complexity of task allocation. Complexity, 3, 52-60.
  • Schoneveld, A., de Ronde, J. F., & Sloot, P. M. A. (1997). On the complexity of task allocation. Complexity, 3, 52-60. [details] 
  • Schoneveld, A., de Ronde, J. F., & Sloot, P. M. A. (1997). Preserving locality for optimal parallelism in task allocation. In P. M. A. Sloot, & L. O. Hertzberger (Eds.), High-Performance Computing and Networking (pp. 565-574) [details] 
  • Schoneveld, A., de Ronde, J. F., & Sloot, P. M. A. (1997). Task allocation by parallel evolutionary computing. Journal of Parallel and Distributed Computing, 47, 91-97. DOI: 10.1006/jpdc.1997.1398  [details] 
  • Sloot, P. M. A., & Liddell, H. (1997). Guest editorial, high performance computing and networking europe 1996. In High performance computing and networking europe 1996 (Future Generation Computer Systems; No. volume 12). [details] 
  • Voogd, J. M., Sloot, P. M. A., & van Dantzig, R. (1997). Symmetries of crystalline arrangements in spherical 2d lennard-jones systems. Bulletin of the American Physical Society, 1601. [details] 
  • de Ronde, J. F., Schoneveld, A., & Sloot, P. M. A. (1997). Load Balancing by Redundant Decomposition and Mapping. Future Generation Computer Systems, 12, 391-407. DOI: 10.1016/S0167-739X(97)83341-9 
  • de Ronde, J. F., van Albada, G. D., & Sloot, P. M. A. (1997). High performance simulation of gravitational radiation antennas. In P. M. A. Sloot, & L. O. Hertzberger (Eds.), High Performance Computing and Networking '97 (pp. 200-212). (Lecture Notes in Computer Science). Springer. [details] 
  • de Ronde, J. F., van Albada, G. D., & Sloot, P. M. A. (1997). Simulation of gravitational wave detectors. Computers in Physics, 11(5), 484-497. DOI: 10.1063/1.168591  [details] 
  • Koponen, A., Kataja, M., Timonen, J., Kandhai, B. D., Hoekstra, A. G., & Sloot, P. M. A. (1997). Fluid flow in three-dimensional random fibre webs. In CSC News, High Performance Computing and Networking in Finland (pp. 12-14) [details] 
  • Koponen, A., Kandhai, B. D., Hellen, E., Alava, M., Hoekstra, A. G., Kataja, M., ... Timonen, J. (1997). Permeability of three-dimensional random fibre webs. Physical Review Letters. [details] 

1996

  • Hoekstra, A. G., Grimminck, M. D., & Sloot, P. M. A. (1996). Simulating Light Scattering from micron-sized particles: A parallel Fast Discrete Dipole Approximation. In A. Colbrook, H. Lidell, L. O. Hertzberger, & P. M. A. Sloot (Eds.), Proceedings High Performance Computing and Networking Europe 1996 (pp. 269-275). (LNCS; No. 1067). [details] 
  • Hoekstra, A. G., & Sloot, P. M. A. (1996). Parallel Hierarchical Methods for Large Scale Simulations of Virtual Particle Models. In P. M. A. Sloot, E. J. H. Kerckhoffs, J. F. M. Tonino, & A. M. Vossepoel (Eds.), ASCI 1996, Proceedings of the second annual conference of the Advanced School for Computing and Imaging (pp. 49-53) [details] 
  • Hoekstra, A. G., & Sloot, P. M. A. (1996). The Discrete Dipole Approximation - Possibilities and Problems to Simulate Elastic Light Scattering. In M. Quinten, T. Wriedt, & K. Bauckhage (Eds.), Proceedings of the 1st Workshop on Electromagnetic and Light Scattering, Theory and Applications (pp. 7-18). Bremen: University of Bremen. [details] 
  • Hoekstra, A. G., Hertzberger, L. O., & Sloot, P. M. A. (1996). The Optical `Fingerprints' of Cells: Catching the Bad Guys. IEEE Computational Science and Engineering, Spring, 4-5. [details] 
  • Hoekstra, A. G., Sloot, P. M. A., van der Linden, F., van Muiswinkel, M., Vesseur, J. J. J., & Hertzberger, L. O. (1996). Native and Generic Parallel Programming Environments on a Transputer and a PowerPC Platform. Concurrency Practice and Experience, 8, 19-46. [details] 
  • Kaandorp, J. A., & Sloot, P. M. A. (1996). Modelling and simulation of accretive growth and form on a parallel platform. In P. M. A. Sloot, E. J. H. Kerckhoffs, J. F. M. Tonino, & A. M. Vossepoel (Eds.), ASCI '96, Proceedings of the second annual conference of the Advanced School for Computing and Imaging (pp. 54-59). Delft: Advanced School for Computing and Imaging (ASCI). [details] 
  • Kaandorp, J. A., & Sloot, P. M. A. (1996). Modelling diffusion and flow limited morphogenesis of marine sessile orginisms. In 3rd European conference of mathematics applied to biology and medicine Heidelberg.
  • Kaandorp, J. A., & Sloot, P. M. A. (1996). Modelling growth and form of marine sessile suspension feeders. In M. T. Michalewicz (Ed.), Advances in Computational Life Sciences Vol. 1 (pp. 129-132). Collingwood, Australia: CSIRO Publishing. [details] 
  • Kaandorp, J. A., Lowe, C. P., Frenkel, D., & Sloot, P. M. A. (1996). The effect of nutrient diffusion and flow on coral morphology. Physical Review Letters, 77(11), 2328-2331. DOI: 10.1103/PhysRevLett.77.2328  [details] 
  • Kandhai, B. D., Sloot, P. M. A., & Huot, J. P. (1996). Constrained Migration: exploiting spatial locality. In E. J. H. Kerckhoffs, P. M. A. Sloot, J. F. M. Tonino, & A. M. Vossepoel (Eds.), ASCI 1996 Conference Proceedings (pp. 60-65). Lommel, Belgium: Advanced School for Computing and Imaging (ASCI). [details] 
  • Kandhai, B. D., Sloot, P. M. A., & Huot, J. P. (1996). Constrained migration of an atmospheric circulation model. In A. Colbrook, H. Liddel, & P. M. A. Sloot (Eds.), High-performance computing and networking (pp. 269-275). Brussels-Belgium: Springer-Verlag. [details] 
  • Overeinder, B. J., Sloot, P. M. A., Heederik, R. N., & Hertzberger, L. O. (1996). A Dynamic Load Balancing System for Parallel Cluster Computing. Future Generation Computer Systems, 12(1), 101-115. DOI: 10.1016/0167-739X(95)00038-T  [details] 
  • Schoneveld, A., de Ronde, J. F., Sloot, P. M. A., & Kaandorp, J. A. (1996). A Parallel Cellular Genetic Algorithm Used in Finite Element Simulation. In H-P. Schwefel, H-M. Voigt, I. Rechenberg, & W. Ebeling (Eds.), Parallel Problem Solving from Nature IV (pp. 533-542). (LNCS; No. 1141). [details] 
  • Sloot, P. M. A., & Kaandorp, J. A. (1996). Particle modelling environment for dynamic complex system simulation. In S. van der Kolk, R. van Grondelle, O. J. G. Somsen, H. V. Westerhoff, & J. E. Wijker (Eds.), Biocomplexity and the essence of the living state (pp. 83-85). Amsterdam: Free University. [details] 
  • Sloot, P. M. A., Frenkel, D., Kaandorp, J. A., & van Driel, R. (1996). Modelling and simulation of reactivity, diffusion, and flow in biological systems using the lattice Boltzmann method. In S. van der Kolk, R. van Grondelle, O. J. G. Somsen, H. V. Westerhoff, & J. E. Wijker (Eds.), Biocomplexity and the essence of the living state (pp. 80-82). Amsterdam: Free University. [details] 
  • de Ronde, J. F., Schoneveld, A., Floros, N., Reeve, J. F., & Sloot, P. M. A. (1996). Loadbalancing by redundant decomposition and mapping. In H. Liddell, A. Colbrook, L. O. Hertzberger, & P. M. A. Sloot (Eds.), High-Performance Computing and Networking (HPCN Europe '96), Brussels, Belgium (Vol. 1067, pp. 555-561)
  • de Ronde, J. F., Schoneveld, A., & Sloot, P. M. A. (1996). A Genetic Algorithm Based Tool for the Mapping Problem. In E. J. H. Kerckhoffs, J. F. M. Tonino, P. M. A. Sloot, & A. M. Vossepoel (Eds.), Proceedings of the second Annual Conference of the Advanced School for Computing and Imaging (pp. 174-179) [details] 
  • de Ronde, J. F., Schoneveld, A., Sloot, P. M. A., Floros, N., & Reeve, J. (1996). Load Balancing by Redundant Decomposition and Mapping. In A. Colbrook, H. Liddell, L. O. Hertzberger, & P. M. A. Sloot (Eds.), High Performance Computing and Networking (pp. 555-561). (LNCS; No. 1067). [details] 
  • Doornbos, R. M. P., Schaeffer, M., Hoekstra, A. G., Sloot, P. M. A., de Grooth, B. G., & Greve, J. (1996). Elastic Light Scattering Measurements of Single Biological Cells in an Optical Trap. Applied Optics, 34, 729-734. DOI: 10.1364/AO.34.000729  [details] 

1995

  • Hoekstra, A. G., & Sloot, P. M. A. (1995). Coupled Dipole Simulations of Elastic Light Scattering on Parallel Systems. International Journal of Modern Physics C, 6, 663-679. DOI: 10.1142/S0129183195000563  [details] 
  • Hoekstra, A. G., & Sloot, P. M. A. (1995). Development of Parallel Hierarchical Methods. In PowerXplorer User Report, 1st edition (pp. 70-76)
  • Hoekstra, A. G., & Sloot, P. M. A. (1995). Simulating Elastic Light Scattering. In PowerXplorer User Report, 1st edition (pp. 65-69)
  • Hoekstra, A. G., Sloot, P. M. A., & Hertzberger, L. O. (1995). Comparing the Parix and PVM parallel programming enviroments. In Transputer and Occam Engineering Series, Parallel Programming and Applications, Workshop Proceedings (pp. 13-17). Amsterdam, Netherlands: IOS Press.
  • Overeinder, B. J., & Sloot, P. M. A. (1995). Parallel Discrete Event Simulation Performance Modelling and Evaluation. PowerXplorer User Report, 1st edition, 137-144.
  • Pimentel, A. D., Hertzberger, L. O., & Sloot, P. M. A. (1995). Mermaid: Modelling and Evaluation Research in MIMD Architecture Design. In PowerXplorer User Report, 1st edition (pp. 145-151)
  • Pimentel, A. D., van Brummen, J., Papathanassiadis, T., Sloot, P. M. A., & Hertzberger, L. O. (1995). Mermaid: modelling and evaluation research in MIMD architecture design. In Lecture Notes in Computer Science 919, High Performance Computing and Networking (pp. 335-340). Berlin, Germany: Springer-Verlag.
  • Schoneveld, A., Kaandorp, J. A., & Sloot, P. M. A. (1995). Parallel Dynamical Complex Systems. In PowerXplorer User Report, 1st edition (pp. 152-156)
  • Sloot, P. M. A. (1995). High Performance Simulation. EUROSIM - Simulation News Europe, 1, 15-18. [details] 
  • Sloot, P. M. A. (1995). Modelling for Parallel Simulation: Possibilities and Pitfalls. In I. Husinsky, & F. Breitenecker (Eds.), Proceedings of the 1995 EUROSIM Conference, EUROSIM'95 (pp. 29-43). Amsterdam: Elsevier. [details] 
  • Voogd, J. M., & Sloot, P. M. A. (1995). Simulated Annealing: Comparisons of Vector and Parallel Implementations. In ASCI 1995 Conference Proceedings (pp. 213-222). Advanced School for Computing and Imaging (ASCI).
  • Voogd, J. M., Sloot, P. M. A., & van Dantzig, R. (1995). Comparison of Vector and Parallel Implementations of the Simulated Annealing Algorithm. Future Generation Computer Systems, 11, 467. DOI: 10.1016/0167-739X(95)00016-L 
  • Voogd, J. M., Sloot, P. M. A., & van Dantzig, R. (1995). Comparison of vector and parallel implementations of the simulated annealing algorithm. Future Generation Computer Systems, 11, 467-475. DOI: 10.1016/0167-739X(95)00016-L  [details] 

1994

  • Hoekstra, A. G., Doornbos, R. M. P., Deurloo, K. E. I., Noordmans, H. J., de Grooth, B. G., & Sloot, P. M. A. (1994). Yet another face of Lorenz-Mie scattering: monodisperse distributions of spheres produce Lissajous-like patterns. Applied Optics, 33, 494-500. DOI: 10.1364/AO.33.000494  [details] 

1993

  • Doornbos, R. M. P., Hoekstra, A. G., Deurloo, K. E. I., de Grooth, B. G., Sloot, P. M. A., & Greve, J. (1993). Polarization measurements in a Flow Cytometer; Lissajous Pattererns in scatter plots of calibrations beads. Cytometry, Supplement.
  • Hoekstra, A. G., & Sloot, P. M. A. (1993). Dipolar Unit Size in Coupled Dipole Calculations of the Scattering Matrix Elements Elements. Optics Letters, 18, 1211-1213. DOI: 10.1364/OL.18.001211 
  • Hoekstra, A. G., & Sloot, P. M. A. (1993). Implementation of a Parallel Conjugate Gradient Method for Simulation of Elastic Light. In R. A. de Groot, & E. J. Nadrachal (Eds.), The 4th international conference Physics Computing '92 (pp. 345-346). Prague, Czechoslovakia: World Scientific Singapore.
  • Hoekstra, A. G., & Sloot, P. M. A. (1993). New computational techniques to simulate Light Scattering from arbitrary particles. In M. Maeda (Ed.), The 3rd International Congress on Optical Particle Sizing '93 (pp. 167-172). Yokohama, Japan.
  • Hoekstra, A. G., & Sloot, P. M. A. (1993). Simulating Elastic Light Scattering using High Performance Computing methods. In A. Verbraeck, & E. J. H. Kerckhoffs (Eds.), European Simulation Symposium 1993 (pp. 462-467). Delft, The Netherlands: Simulation Councils Inc., San Diego.
  • Hoekstra, A. G., Doornbos, R. M. P., Deurloo, K. E. I., Noordmans, H. J., de Grooth, B. G., & Sloot, P. M. A. (1993). An unexpected signature of Lorenz-Mie scattering observed in FlowCytometric experiments. In M. Maeda (Ed.), The 3rd International Congress on Optical Particle Sizing '93 (pp. 153-158). Yokohama, Japan.
  • Overeinder, B. J., & Sloot, P. M. A. (1993). Application of Time Warp to Parallel simulations with asynchronous cellular automata. In A. Verbraeck, & E. J. H. Kerckhoffs (Eds.), European Simulation Symposium 1993 (pp. 397-402). Delft, The Netherlands.
  • Sloot, P. M. A., ter Laak, A., Pandolfi, P., van Dantzig, R., & Frenkel, D. (1993). Crystallization on a Sphere. In R. A. de Groot, & E. J. Nadrachal (Eds.), The 4th international conference Physics Computing '92 (pp. 471-472). Prague, Czechoslovakia: World Scientific Singapore.
  • Sloot, P. M. A., & Hoekstra, A. G. (1993). Light Scattering simulations on a massively parallel computer at the IC3A. Transputer Applications, 1, 42-49.
  • Voogd, J. M., & Sloot, P. M. A. (1993). Simulated annealing on H.P.C. systems: Applied to crystallization with spherical boundary conditions. In A. Verbraeck, & E. J. H. Kerckhoffs (Eds.), European Simulation Symposium 1993 (pp. 371-376). Delft, The Netherlands.
  • de Ronde, J. F., Sloot, P. M. A., Beemster, M., & Hertzberger, L. O. (1993). A simulation methodology for the prediction of SPMD programs performance. In A. Verbraeck, & E. J. H. Kerckhoffs (Eds.), European Simulation Symposium 1993 (pp. 24-25). Delft, The Netherlands.
  • Lonsdale, G., Clinckemaillie, J., Vlachoutsis, S., de Ronde, J. F., Sloot, P. M. A., Floros, N., & Reeve, J. F. (1993). Crashworthiness simulation migration to distributed memory and MIMD machines. In The 26th International Symposium on Automotive Technology and Automation (pp. 237-244). Croydon, England.

1992

  • Belleman, R. G., Sloot, P. M. A., & Hertzberger, L. O. (1992). Multivariate data processing system: transputer based data acquisition, analysis and presentation. In Parallel Computing and Transputer Applications (PACTA 92) (pp. 1147-1155). Amsterdam, The Netherlands: IOS Press, Washington.
  • Overeinder, B. J., Sloot, P. M. A., & Hertzberger, L. O. (1992). Time Warp on a Transputer Platform: Pilot Study with Asynchronous Cellular Automata. In M. Valero, E. Onate, M. Jane, J. L. Larriba, & B. Suarez (Eds.), Parallel Computing and Transputer Applications (PACTA 92) (pp. 1303-1312). Amsterdam, Washington: IOS Press.
  • Sloot, P. M. A. (1992). De Computer Oorlog. In PC+ (pp. 20-1)
  • Sloot, P. M. A. (1992). Multiprocessing zorgt voor teamwork. In PC+ (pp. 22-24). (8).
  • Sloot, P. M. A., ter Laak, A., Pandolfi, P., & van Dantzig, R. (1992). Crystallization on a Sphere: Parallel Simulation on a Transputer Network. Computers in Physics, 6, 307-308.
  • Sloot, P. M. A., & Hoekstra, A. G. (1992). Implementation of a parallel conjugate gradient method for simulation of elastic light scattering. Computers in Physics, 6, 323-323.
  • van Muiswinkel, M., Trip, L. H., & Sloot, P. M. A. (1992). Parallel Sound Synthesis: Parallel Sonification of Multivariate data on a transputer platform. In Parallel Computing and Transputer Applications (PACTA 92) (pp. 1156-1164). Amsterdam, Washington: IOS Press.
  • de Graaff, R., Aarnoudse, J. G., Zijp, J. R., Sloot, P. M. A., de Mul, F. F. M., Greve, J., & Koelink, M. H. (1992). Reduced light-scattering properties for mixtures off spherical particles: a simple approximation derived from Mie Calculations. Applied Optics, 31, 1370-1376. DOI: 10.1364/AO.31.001370 
  • ter Laak, A., Hertzberger, L. O., & Sloot, P. M. A. (1992). Nonconvex continuous optimization experiments on a transputer system. In A. Allen (Ed.), Transputer systems ongoing research (Vol. 25, pp. 251-265). IOS Press.

1991

  • Hoekstra, A. G., Aten, J., & Sloot, P. M. A. (1991). The effect of aniosmotic media on the volume of the T-lymphocyte nucleus. Biophysical Journal, 59, 765-774. DOI: 10.1016/S0006-3495(91)82289-5 
  • Hoekstra, A. G., Hertzberger, L. O., & Sloot, P. M. A. (1991). Simulation of Elastic Light Scattering on distributed memory machines. Bulletin of the American Physical Society, 36, 1798-1798.
  • Hoekstra, A. G., Sloot, P. M. A., Haan, M. J., & Hertzberger, L. O. (1991). Time complexity analysis for distributed memory computers: Implementation of a parallel Conjugate Gradient method. In J. van Leeuwen (Ed.), Computing Science in the Netherlands (pp. 249-266). Amsterdam, The Netherlands.
  • Overeinder, B. J., Hertzberger, L. O., & Sloot, P. M. A. (1991). Parallel Discrete Event Simulation. In W. J. Withagen (Ed.), The Third Workshop Computersystems (pp. 19-30). Eindhoven, The Netherlands.
  • Sloot, P. M. A. (1991). Wegwijs in Wiskunde. In PC+ (pp. 36). (22).

1990

  • Sloot, P. M. A., & Hoekstra, A. G. (1990). Morphological characteristics of nucleated bloodcells studied by elastic light scattering. In E. D. Hirleman (Ed.), The 2nd international congress on particle sizing (pp. 382-394). Tempe, Arizona.
  • Sloot, P. M. A., Hoekstra, A. G., van der Liet, H., & Figdor, C. G. (1990). Arbitrarily-shaped particles measured in flow-through systems. In E. D. Hirleman (Ed.), Proceedings of the 2nd International Congress on Optical Particle Sizing: Mechanical and Aerospace Engineering, Arizona State University, Tempe, Arizona, March 5-8, 1990 (pp. 605-611). Tempe: Arizona State University. [details] 

1989

  • Sloot, P. M. A., & Figdor, C. G. (1989). Ternary representation of trivariate data. Cytometry, 10(1), 77-80. DOI: 10.1002/cyto.990100113  [details] 
  • Sloot, P. M. A., Carels, M. J., & Hoekstra, A. G. (1989). CACE: a case of Embedded System Development. In P. M. G. Apers, & J. van Leeuwen (Eds.), Computing Science in the Netherlands (pp. 441-462). Amsterdam, The Netherlands.
  • Sloot, P. M. A., Hoekstra, A. G., van de Liet, H., & Figdor, C. G. (1989). Scatter matrix elements of biological particles measured in a flow-through system: Theory and practice. Applied Optics, 28, 1752-1762.

1988

  • Sloot, P. M. A., van der Donk, E. H. M., & Figdor, C. G. (1988). Computer Assisted Centrifugal Elutriation II. Multiparametric statistical analysis. Computer Methods and Programs in Biomedicine, 27, 37-46. DOI: 10.1016/0169-2607(88)90101-0 
  • Sloot, P. M. A., Hoekstra, A. G., & Figdor, C. G. (1988). Osmotic response of lymphocytes measured by means of forward lightscattering: theoretical considerations. Cytometry, 9(6), 636-641. DOI: 10.1002/cyto.990090620  [details] 

1987

  • Sloot, P. M. A., Carels, M. J., Tensen, P., & Figdor, C. G. (1987). Computer Assisted Centrifugal Elutriation I. Detection system and data acquisition equipment. Computer Methods and Programs in Biomedicine, 24, 179-188. DOI: 10.1016/0169-2607(87)90030-7 
  • Sloot, P. M. A., Tensen, P., & Figdor, C. G. (1987). Spectral analysis of flow cytometric data: design of a special purpose low-pass digital filter. Cytometry, 8(6), 545-551. DOI: 10.1002/cyto.990080603  [details] 

1986

  • Sloot, P. M. A., & Figdor, C. G. (1986). Elastic light scattering from nucleated bloodcells: Rapid numerical analysis. Applied Optics, 25, 3559. DOI: 10.1364/AO.25.003559 

2018

  • Shi, Y., Fu, H., Tian, Y., Krzhizhanovskaya, V. V., Lees, M. H., Dongarra, J., & Sloot, P. M. A. (2018). Preface. In Y. Shi, H. Fu, Y. Tian, V. V. Krzhizhanovskaya, M. H. Lees, J. Dongarra, & P. M. A. Sloot (Eds.), Computational Science – ICCS 2018: 18th International Conference, Wuxi, China, June 11–13, 2018 : Proceedings, Part I (Vol. 1, pp. V-VI). (Lecture Notes in Computer Science; Vol. 10860). Cham: Springer. DOI: 10.1007/978-3-319-93698-7  [details] 
  • Shi, Y., Fu, H., Tian, Y., Krzhizhanovskaya, V. V., Lees, M. H., Dongarra, J., & Sloot, P. M. A. (2018). Preface. In Y. Shi, H. Fu, Y. Tian, V. V. Krzhizhanovskaya, M. H. Lees, J. Dongarra, & P. M. A. Sloot (Eds.), Computational Science – ICCS 2018: 18th International Conference, Wuxi, China, June 11–13, 2018 : Proceedings, Part II (Vol. 2, pp. V-VI). (Lecture Notes in Computer Science; Vol. 10861). Cham: Springer. DOI: 10.1007/978-3-319-93701-4  [details] 
  • Shi, Y., Fu, H., Tian, Y., Krzhizhanovskaya, V. V., Lees, M., Dongarra, J., & Sloot, P. M. A. (2018). Preface. In Y. Shi, H. Fu, Y. Tian, V. V. Krzhizhanovskaya, M. H. Lees, J. Dongarra, & P. M. A. Sloot (Eds.), Computational Science – ICCS 2018: 18th International Conference, Wuxi, China, June 11–13, 2018 : proceedings (Vol. 3, pp. V-VI). (Lecture Notes in Computer Science; Vol. 10862). Cham: Springer. DOI: 10.1007/978-3-319-93713-7  [details] 

2017

  • Koumoutsakos, P., Lees, M., Krzhizhanovskaya, V., Dongarra, J., & Sloot, P. (2017). International Conference on Computational Science, ICCS 2017: 12-14 June 2017, Zurich, Switzerland. (Procedia Computer Science; Vol. 108). Elsevier. [details] 

2016

  • Altintas, I., Norman, M., Dongarra, J., Krzhizhanovskaya, V. V., Lees, M., & Sloot, P. M. A. (2016). International Conference on Computational Science 2016, ICCS 2016: 6-8 June 2016, San Diego, California, USA. (Procedia Computer Science; Vol. 80). Elsevier. [details] 

2015

  • Koziel, S., Leifsson, L., Lees, M., Krzhizhanovskaya, V. V., Dongarra, J., & Sloot, P. M. A. (2015). International Conference On Computational Science, ICCS 2015: Computational Science at the Gates of Nature. (Procedia Computer Science; No. 51). Amsterdam: Elsevier. [details] 

2014

  • Melnikova, N. B., Jordan, D., Krzhizhanovskaya, V. V., & Sloot, P. M. A. (2014). Slope Instability of the Earthen Levee in Boston, UK: Numerical Simulation and Sensor Data Analysis. Ithaca, NY: arXiv.org. [details] 
  • Abramson, D., Lees, M., Krzhizhanovskaya, V. V., Dongarra, J., & Sloot, P. M. A. (2014). Big Data Meets Computational Science: preface for ICCS 2014. Procedia Computer Science, 29, 1-7. DOI: 10.1016/j.procs.2014.04.002  [details] 
  • Abramson, D., Lees, M., Krzhizhanovskaya, V., Dongarra, J., & Sloot, P. M. A. (2014). 2014 International Conference on Computational Science. (Procedia Computer Science; No. 29). Amsterdam: Elsevier. [details] 

2013

  • Sloot, P. M. A., Kampis, G., & Gulyás, L. (2013). Advances in dynamic temporal networks: understanding the temporal dynamics of complex adaptive networks. The European Physical Journal - Special Topics, 222(6), 1287-1293. DOI: 10.1140/epjst/e2013-01926-8  [details] 
  • Alexandrov, V., Lees, M., Krzhizhanovskaya, V., Dongarra, J., & Sloot, P. M. A. (2013). International Conference on Computational Science, ICCS 2013: Barcelona, Spain, June 5- June 7, 2013. (Procedia Computer Science; No. 18). Elsevier: Amsterdam. [details] 

2012

  • Sloot, P. M. A., & Quax, R. (2012). Information processing as a paradigm to model and simulate complex systems. Journal of Computational Science, 3(5), 247-249. DOI: 10.1016/j.jocs.2012.07.001  [details] 
  • Ali, H., Shi, Y., Khazanchi, D., Lees, M., van Albada, G. D., Dongarra, J., & Sloot, P. M. A. (2012). Proceedings of the International Conference on Computational Science, ICCS 2012. (Procedia Computer Science; No. 9). [Amsterdam]: Elsevier. [details] 
  • Ali, H., Shi, Y., Khazanchi, D., Lees, M., van Albada, G. D., Dongarra, J., & Sloot, P. M. A. (2012). Empowering Science through Computing, preface for ICCS 2012. Procedia Computer Science, 9, 1-6. DOI: 10.1016/j.procs.2012.04.001  [details] 

2011

  • Bui, Q. C., & Sloot, P. M. A. (2011). Extracting biological events from text using simple syntactic patterns. In Proceedings of BioNLP Shared Task 2011 Workshop: Portland, Oregon, USA, 24 June, 2011 (pp. 143-146). Stroudsburg, PA: Association for Computational Linguistics. [details] 
  • Zarrabi, N., Prosperi, M., de Luca, A., & Sloot, P. M. A. (2011). Inferring HIV transmission networks from epidemic and genetic information. In European Conference on Complex Systems, ECCS'11 (pp. 138)
  • Sato, M., Matsuoka, S., Sloot, P. M. A., van Albada, G. D., & Dongarra, J. (2011). Proceedings of the International Conference on Computational Science, ICCS 2011. (Procedia Computer Science; No. 4). Amsterdam: Elsevier. [details] 

2010

  • Hoekstra, A. G., Kroc, J., & Sloot, P. M. A. (2010). Simulating complex systems by cellular automata. (Understanding complex systems). Heidelberg: Springer. DOI: 10.1007/978-3-642-12203-3  [details] 
  • Hoekstra, A. G., Kroc, J., & Sloot, P. M. A. (2010). Introduction to modeling of complex systems using cellular automata. In A. G. Hoekstra, J. Kroc, & P. M. A. Sloot (Eds.), Simulating complex systems by cellular automata (pp. 1-16). (Understanding complex systems). Heidelberg: Springer. DOI: 10.1007/978-3-642-12203-3_1  [details] 
  • Sloot, P. M. A., van Albada, G. D., & Dongarra, J. (2010). International Conference on Computational Science, ICCS 2010. (Procedia Computer Science; No. 1(1)). Amsterdam: Elsevier. [details] 
  • Bellavista, P., Chang, R-S., Chao, H-C., Lin, S-F., & Sloot, P. M. A. (2010). Advances in Grid and Pervasive Computing: 5th International Conference, GPC 2010, Hualien, Taiwan, May 10-13, 2010: Proceedings. (Lecture Notes in Computer Science; No. 6104). Berlin: Springer. DOI: 10.1007/978-3-642-13067-0  [details] 

2009

  • Allen, G., Nabrzyski, J., Seidel, E., van Albada, G. D., Sloot, P. M. A., & Dongarra, J. (2009). Computational science - ICCS 2009: 9th International Conference Baton Rouge, LA, USA, May 25-27, 2009: proceedings. (Lecture notes in computer science; No. 5544-5545). Berlin, Heidelberg: Springer. DOI: 10.1007/978-3-642-01973-9  [details] 

2008

  • Bubak, M., van Albada, G. D., Dongarra, J., & Sloot, P. M. A. (2008). Computational science - ICCS 2008: 8th international conference, Kraków, Poland, June 23-25, 2008: Proceedings, part I. (Lecture notes in computer science; No. 5101). Berlin: Springer. [details] 
  • Bubak, M., van Albada, G. D., Dongarra, J., & Sloot, P. M. A. (2008). Computational science - ICCS 2008: 8th international conference, Kraków, Poland, June 23-25, 2008: Proceedings, part II. (Lecture notes in computer science; No. 5102). Berlin: Springer. [details] 
  • Bubak, M., van Albada, G. D., Dongarra, J., & Sloot, P. M. A. (2008). Computational science - ICCS 2008: 8th international conference, Kraków, Poland, June 23-25, 2008: Proceedings, part III. (Lecture notes in computer science; No. 5103). Berlin: Springer. [details] 
  • Ertaylan, G., & Sloot, P. M. A. (2008). A complex automata model of HIV-1 co-receptor tropism: Mutation rate prediction. In M. Bubak, M. Turała, & K. Wiatr (Eds.), Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings (pp. 85). Kraków: Academic Computer Centre CYFRONET AGH. [details] 
  • Sloot, P. M. A., Tirado-Ramos, A., Ertaylan, G., O Nuallain, B., van de Vijver, D., Boucher, C. A., & Bubak, M. (2008). VIROLAB: A distributed decision support system for viral disease treatment. In M. Bubak, M. Turała, & K. Wiatr (Eds.), Cracow'07 Grid Workshop: October 15-17, 2007 Cracow, Poland: proceedings (pp. 33-34). Kraków: Academic Computer Centre CYFRONET AGH. [details] 

2007

  • Sloot, P. M. A. (2007). International Conference on Computational Science series. Amsterdam: Elsevier.
  • Dubizky, W., Schuster, A., Sloot, P. M. A., Schroeder, M., & Romberg, M. (2007). Distributed, High-Performance and Grid Computing in Computational Biology. (Lecture Notes in Computer Science; No. 4360). Berlin, Heidelberg: Springer. [details] 
  • Shi, Y., van Albada, G. D., Dongarra, J. J., & Sloot, P. M. A. (2007). Computational Science - ICCS 2007: 7th International Conference, Beijing, China, Proceedings, Part I. (Lecture Notes in Computer Science; No. 4487). Berlin, Heidelberg: Springer. [details] 
  • Shi, Y., van Albada, G. D., Dongarra, J. J., & Sloot, P. M. A. (2007). Computational Science - ICCS 2007: 7th International Conference, Beijing, China, Proceedings, Part II. (Lecture Notes in Computer Science; No. 4488). Berlin, Heidelberg: Springer. [details] 
  • Shi, Y., van Albada, G. D., Dongarra, J. J., & Sloot, P. M. A. (2007). Computational Science - ICCS 2007: 7th International Conference, Beijing, China, Proceedings, Part III. (Lecture Notes in Computer Science; No. 4489). Berlin, Heidelberg: Springer. [details] 
  • Shi, Y., van Albada, G. D., Dongarra, J. J., & Sloot, P. M. A. (2007). Computational Science - ICCS 2007: 7th International Conference, Beijing, China, Proceedings, Part IV. (Lecture Notes in Computer Science; No. 4490). Berlin, Heidelberg: Springer. [details] 

2006

  • Sloot, P. M. A. (2006). eScience 2006, Amsterdam, Proceedings published by IEEE. Amsterdam: IEEE.
  • Sloot, P. M. A. (2006). A report on the Virolab project in the bi-monthly journal: NIP News September. NIP news, 2.
  • Sloot, P. M. A., van Albada, G. D., Bubak, M. T., & Trefethen, A. (2006). 2nd IEEE International Conference on e-Science and Grid Computing. IEEE. [details] 
  • Alexandrov, V. N., van Albada, G. D., Sloot, P. M. A., & Dongarra, J. J. (2006). Computational Science - ICCS 2006: 6th International Conference, Reading, UK, Proceedings, Part I. (Lecture Notes in Computer Science; No. 3991). Berlin, Heidelberg: Springer. [details] 
  • Alexandrov, V. N., van Albada, G. D., Sloot, P. M. A., & Dongarra, J. J. (2006). Computational Science - ICCS 2006: 6th International Conference, Reading, UK, Proceedings, Part II. (Lecture Notes in Computer Science; No. 3992). Berlin, Heidelberg: Springer. [details] 
  • Alexandrov, V. N., van Albada, G. D., Sloot, P. M. A., & Dongarra, J. J. (2006). Computational Science - ICCS 2006: 6th International Conference, Reading, UK, Proceedings, Part III. (Lecture Notes in Computer Science; No. 3993). Berlin, Heidelberg: Springer. [details] 
  • Alexandrov, V. N., van Albada, G. D., Sloot, P. M. A., & Dongarra, J. J. (2006). Computational Science - ICCS 2006: 6th International Conference, Reading, UK, Proceedings, Part III. (Lecture Notes in Computer Science; No. 3994). Berlin, Heidelberg: Springer. [details] 
  • Lee, G., Slezak, D., Kim, T. H., Sloot, P. M. A., Kim, H-K., Ko, I. S., & Szczuka, M. (2006). IEEE Proceedings of the 2006 International Conference on Hybrid Information Technology. IEEE. [details] 

2005

  • Belleman, R. G., Sloot, P. M. A., Zudilova-Seinstra, E. V., & Osseyran, A. (2005). Simulation, visualisation, interaction and mixed reality: views of the University of Amsterdam and SARA. In EU workshop on simulation, Visualisation, Interaction and Mixed Reality [details] 
  • Sloot, P. M. A., Hoekstra, A. G., Priol, T., Reinefeld, A., & Bubak, M. T. (2005). Advances in Grid Computing - EGC 2005. (Lecture Notes in Computer Science; No. 3470). Berlin: Springer. [details] 
  • Sloot, P. (2005). International Journal on Grid Computing, theory, methods and applications. Amsterdam: Elsevier.
  • Sunderam, V. S., van Albada, G. D., Sloot, P. M. A., & Dongarra, J. J. (2005). Proc. 5th ICCS, Part I. (Lecture Notes in Computer Science; No. 3514). Berlin: Springer. [details] 
  • Sunderam, V. S., van Albada, G. D., Sloot, P. M. A., & Dongarra, J. J. (2005). Proc. 5th ICCS, Part II. (Lecture Notes in Computer Science; No. 3515). Berlin: Springer. [details] 
  • Sunderam, V. S., van Albada, G. D., Sloot, P. M. A., & Dongarra, J. J. (2005). Proc. 5th ICCS, Part III. (Lecture Notes in Computer Science; No. 3516). Berlin: Springer. [details] 

2004

  • Krzhizhanovskaya, V. V., Gorbachev, Y. E., & Sloot, P. M. A. (2004). A Grid-Based Problem-Solving Environment for Simulation of Plasma Enhanced Chemical Vapor Deposition. In Book of abstracts of the International conference "Distributed Computing and Grid Technologies in Science and Education" (pp. 89-90). Dubna, Russia: JINR. [details] 
  • Sloot, P. M. A., Chopard, B., & Hoekstra, A. G. (2004). Cellular Automata, Proccedings ACRI2004. (Lecture Notes in Computer Science; No. 3305). Berlin/Heidelberg: Springer. [details] 
  • Sloot, P. M. A., Tirado-Ramos, A., Hoekstra, A. G., & Bubak, M. (2004). An interactive grid environment for non-invasive vascular reconstruction. In 2nd international workshop on biomedical computations on the grid (BioGrid'04) in conjunction with fourth IEEE/ACM international symposium on cluster computing and the grid (CCGrid 2004) Chicago, IL: IEEE. [details] 
  • Merks, R. M. H., Hoekstra, A. G., Kaandorp, J. A., & Sloot, P. M. A. (2004). Polyp oriented modelling of coral growth. Journal of Theoretical Biology, 228(4), 559-576. DOI: 10.1016/j.jtbi.2004.02.020  [details] 
  • Spinnato, P. F., van Albada, G. D., & Sloot, P. M. A. (2004). Performance modelling of distributed hybrid architectures. IEEE Transactions on Parallel and Distributed Systems, 15(1), 81-92. DOI: 10.1109/TPDS.2004.1264788  [details] 
  • Zajac, K., Tirado-Ramos, A., Zhao, Z., Sloot, P. M. A., & Bubak, M. (2004). Grid services for HLA-based distributed simulation frameworks. Lecture Notes in Computer Science, 147-154. [details] 
  • Zajac, K., Bubak, M., Malawski, M., & Sloot, P. M. A. (2004). Execution and migration management of HLA-based interactive simulations in the grid. Lecture Notes in Computer Science, 872-879. [details] 

2003

  • Artoli, A. M. M., Hoekstra, A. G., & Sloot, P. M. A. (2003). Simulation of a systolic cycle in a realistic artery with the Lattice boltzmann BGK method. International journal of modern physics, 17(1/2), 95-98. [details] 
  • Artoli, A. M. M., Kandhai, B. D., Hoefsloot, H. C. J., Hoekstra, A. G., & Sloot, P. M. A. (2003). Lattice Boltzmann: a robust and accurate solver for interactive computational hymodynamics. Lecture Notes in Computer Science, 1034-1043. [details] 
  • Hoekstra, A. G., van 't Hoff, J., Artoli, A. M. M., & Sloot, P. M. A. (2003). Lattice BGK simulations of unsteady flow in a 2D elastic tube. Lecture Notes in Computer Science, 997-1006. [details] 
  • Kaandorp, J. A., Koopman, E. A., Sloot, P. M. A., Bak, R. P. M., Vermeij, M. J. A., & Lampmann, L. E. H. (2003). Simulation and analysis of flow patterns around the scleractinian coral Madracis mirabilis (Duchassaing and Michelotti). Philosophical Transactions of the Royal Society B - Biological Sciences, 358 (1437), 1551-1557. DOI: 10.1098/rstb.2003.1339  [details] 
  • Sloot, P. M. A., Abrahamson, D., Bogdanov, A. V., Dongarra, J. J., Zomaya, A. Y., & Gorbachev, Y. E. (2003). Computational Science-ICCS 2003, Melbourne, Australia and St. Petersburg, Russia, Proceedings Part I. (LNCS; No. 2657). Heidelberg: Springer Verlag. [details] 
  • Sloot, P. M. A., Abrahamson, D., Bogdanov, A. V., Dongarra, J. J., Zomaya, A. Y., & Gorbachev, Y. E. (2003). Computational Science-ICCS 2003, Melbourne, Australia and St. Petersburg, Russia, Proceedings Part II. (LNCS; No. 2658). Heidelberg: Springer Verlag. [details] 
  • Sloot, P. M. A., Abrahamson, D., Bogdanov, A. V., Dongarra, J. J., Zomaya, A. Y., & Gorbachev, Y. E. (2003). Computational science - ICCS 2003 : International conference, Melbourne, Australia and St. Petersburg, Russia, June 2-4, 2003 : proceedings. - Pt III. (Lecture notes in computer science; No. 2659). Berlin [etc.]: Springer. [details] 
  • Sloot, P. M. A., Abrahamson, D., Bogdanov, A. V., Dongarra, J. J., Zomaya, A. Y., & Gorbachev, Y. E. (2003). Computational science - ICCS 2003 : International conference, Melbourne, Australia and St. Petersburg, Russia, June 2-4, 2003 : proceedings. - Pt IV. (Lecture notes in computer science; No. 2660). Berlin [etc.]: Springer. [details] 
  • Sloot, P. M. A., Abrahamson, D., Bogdanov, A. V., Dongarra, J. J., Zomaya, A. Y., & Gorbachev, Y. E. (2003). Computational science - ICCS 2003 : International conference, Melbourne, Australia and St. Petersburg, Russia, June 2-4, 2003 : proceedings: Pt I. (Lecture notes in computer science; No. 2657). Berlin [etc.]: Springer. [details] 
  • Sloot, P. M. A., Abrahamson, D., Bogdanov, A. V., Dongarra, J. J., Zomaya, A. Y., & Gorbachev, Y. E. (2003). Computational science - ICCS 2003 : International conference, Melbourne, Australia and St. Petersburg, Russia, June 2-4, 2003 : proceedings: Pt II. (Lecture notes in computer science; No. 2658). Berlin [etc.]: Springer. [details] 
  • Sloot, P. M. A., Boucher, C. A., Kiryukhin, I., Saskov, K., & Boukhanovsky, A. V. (2003). A grid-based problem-solving environment for biomedicine. In S. Noerager (Ed.), Proceedings of the first European Healthgrid Conference, January, 16th-17th, 2003 (pp. 300-323). Brussels: Commission of the European Communities, Information Society Directorate-General. [details] 
  • Sloot, P. M. A., van Albada, G. D., & Zudilova, E. V. (2003). A grid-based interactive visualisation of medical images. In S. Noerager (Ed.), Proceedings of the first European Healthgrid Conference, January, 16th-17th, 2003 (pp. 57-66). Brussels: Commission of the European Communities, Information Society Directorate-General. [details] 
  • Spinnato, P. F., Portegies Zwart, S. F., Fellhauer, M., van Albada, G. D., & Sloot, P. M. A. (2003). Tools and Techniques for N-body Simulations. In R. C. Dolcetta (Ed.), Memorie della Societa Astronomica Italiana Supplement (Vol. 1, pp. 54) [details] 
  • Zhao, Z., van Albada, G. D., Tirado-Ramos, A., Zajac, K., & Sloot, P. M. A. (2003). ISS-studio: a prototype for a user-friendly tool for designing interactive experiments in problem solving environments. Lecture Notes in Computer Science, 679-688. [details] 
  • Iskra, K. A., van Albada, G. D., & Sloot, P. M. A. (2003). Time Warp cancellation optimisations on high latency networks. In S. J. Turner, & S. J. E. Taylor (Eds.), Proceedings seventh IEEE international symposium on distributed simulation and real time applications (pp. 128-135). Delft, The Netherlands: IEEE Computer Society. [details] 
  • Kiryukhin, I., Saskov, K., Boukhanovsky, A. V., Keulen, W., Boucher, C. A., & Sloot, P. M. A. (2003). Stochastic modeling of temporal variability of HIV-1 population. Lecture Notes in Computer Science, 125-135. [details] 
  • Merks, R. M. H., Hoekstra, A. G., Kaandorp, J. A., & Sloot, P. M. A. (2003). Diffusion limited growth in laminar flows. International Journal of Modern Physics C, 14(9), 1171-1182. DOI: 10.1142/S0129183103005297  [details] 
  • Merks, R. M. H., Hoekstra, A. G., Kaandorp, J. A., & Sloot, P. M. A. (2003). Models of coral growth: spontaneous branching, compactification and the Laplacian growth assumption. Journal of Theoretical Biology, 224(2), 153-166. DOI: 10.1016/S0022-5193(03)00140-1  [details] 
  • Merks, R. M. H., Hoekstra, A. G., Kaandorp, J. A., & Sloot, P. M. A. (2003). Problem solving environment for modelling stony coral morphogenesis. Lecture Notes in Computer Science, 639-648. [details] 
  • Tirado-Ramos, A., Zajac, K., Zhao, Z., Sloot, P. M. A., van Albada, G. D., & Bubak, M. (2003). Experimental grid access for dynamic discovery and data transfer in distributed interactive simulation systems. Lecture Notes in Computer Science, 284-292. [details] 
  • Zajac, K., Bubak, M., Malawski, M., & Sloot, P. M. A. (2003). Towards a grid management system for HLA-based interactive simulations. In S. J. Turner, & S. J. E. Taylor (Eds.), Proceedings seventh IEEE international symposium on distributed simulation and real time applications (DS-RT 2003) (pp. 4-11). Delft: IEEE Computer Society. [details] 
  • Zudilova, E. V., & Sloot, P. M. A. (2003). Virtual reality and desktop as a combined interaction-visualisation medium for a problem-solving environment. Lecture Notes in Computer Science, 1025-1034. [details] 

2002

  • Kandhai, B. D., Tallarek, U., Hlushkou, D., Hoekstra, A. G., Sloot, P. M. A., & van As, H. (2002). Numerical simulation and measurement of liquid hold-up in biporous media containing discrete stagnant zones. Philosophical Transactions of the Royal Society A - Mathematical, Physical and Engineering Sciences, 360(1792), 521-534. DOI: 10.1098/rsta.2001.0952  [details] 
  • Merks, R. M. H., Hoekstra, A. G., Kaandorp, J. A., & Sloot, P. M. A. (2002). Branching and compactification in a model of coral growth: a critical reinvestigation of the effect of hydrodynamics. In ECMTB2002: 5th Conference of the European Society of the Mathematical and Theoretical Biology, book of abstracts Milano, Italy: European Society of Mathemetical and Theoretical Biology. [details] 
  • Sloot, P. M. A., Tan, C. J. K., Dongarra, J. J., & Hoekstra, A. G. (2002). Computational Science - ICCS 2002: International Conference Amsterdam, The Netherlands, April 21–24, 2002 : proceedings. (Lecture Notes in Computer Science; Vol. 2329). Berlin: Springer. DOI: 10.1007/3-540-46043-8  [details] 
  • Spinnato, P. F., van Albada, G. D., & Sloot, P. M. A. (2002). A Versatile Simulation Model for Hierarchical Treecodes. (Institute of Computer Science, University of Amsterdam; No. CS-2002-01). Amsterdam: Informatics Institute. [details] 
  • Zajac, K., Bubak, M., Malawski, M., Sloot, P. M. A., & Tirado-Ramos, A. (2002). A proposal of services for managing interactive grid applications. In Second Cracow grid workshop [details] 
  • Zudilova, E. V., & Sloot, P. M. A. (2002). A first step to a user centered approach to a development of adaptive simulation-visualization complexes. In Proceedings of the international conference of the systemics, Cybernetics and informatics (pp. 104-110). Orlando, Florida. [details] 

2001

  • Hoekstra, A. G., Frijlink, M. O., Waters, L. B. F. M., & Sloot, P. M. A. (2001). Radiation forces in the discrete dipole approximation. Journal of the Optical Society of America, 18(8), 1944-1953. [details] 
  • Sloot, P. M. A., Overeinder, B. J., & Schoneveld, A. (2001). Self-organized criticality in simulated correlated systems. Computer Physics Communications, 142(1-3), 76-81. DOI: 10.1016/S0010-4655(01)00325-3  [details] 
  • Overeinder, B. J., Schoneveld, A., & Sloot, P. M. A. (2001). Spatio-temporal correlations and rollback distributions in optimistick simulations. In Proceedings of the 15th workshop on parallel and distributed simulation Lake Arrowhead, CA: IEEE Computer Society Press. [details] 

2000

  • Hoekstra, A. G., & Sloot, P. M. A. (2000). Biophysical and Biomedical Applications of Non-Spherical Scattering. In M. I. Mishchenko, J. W. Hovenier, & L. D. Travis (Eds.), Light Scattering by Nonspherical Particles, Theory Measurements and Applications (pp. 585-602). San Diego, San Francisco, New York, Boston, London: Academic Press. [details] 
  • Hoekstra, A. G., & Sloot, P. M. A. (2000). Distributed Particle Simulation of Flow in Complex Geometries. In M. Ingber, H. Powers, & C. A. Brebbia (Eds.), High Performance Computing in Engineering VI (pp. 371-380). Southhampton: Wit Press. [details] 
  • Iskra, K. A., van der Linden, F., Hendrikse, Z. W., Overeinder, B. J., van Albada, G. D., & Sloot, P. M. A. (2000). The implementation of dynamite: an environment for migrating PVM tasks. Operating Systems Review, 34(3), 40-55. [details] 
  • Spinnato, P. F., van Albada, G. D., & Sloot, P. M. A. (2000). Performance modelling of hybrid architectures. In U. Barberis (Ed.), SIMAI 2000, sommari abstracts (pp. 73-74). Rome: Società Italiana di Matematica Applicata e Industriale. [details] 

1999

  • Sloot, P. M. A., Bubak, M. T., Hoekstra, A. G., & Hertzberger, L. O. (1999). Proceedings High-Performance Computing and Networking (HPCN Europe '99), Amsterdam, the Netherlands. (Lecture Notes in Computer Science; No. 1593). Berlin: Springer.
  • Merks, R. M. H., Kaandorp, J. A., & Sloot, P. M. A. (1999). The interplay of hydrodynamics and genetic regulation in the morphogenesis of sponges and stony corals: pilot studies. In Theory and mathematics in biology and medicine: abstracts (pp. 345). European Society for Mathematical and Theoretical Biology (ESMTB). [details] 

1998

  • Belleman, R. G., Kaandorp, J. A., & Sloot, P. M. A. (1998). A virtual environment for the exploration of diffusion and flow phenomena in complex geometries. Future Generation Computer Systems, 14(3/4), 209-214. DOI: 10.1016/S0167-739X(98)00024-7  [details] 
  • Belleman, R. G., Kaandorp, J. A., & Sloot, P. M. A. (1998). Interactive environments for the exploration of large data sets. In B. M. ter Haar Romeny, D. H. J. Epema, & J. F. M. Tonino (Eds.), ASCI'98: proceedings of the fourth annual conference of the Advanced School for Computing and Imaging, Lommel, Belgium, June 9-11 1998 (pp. 264-268). Delft: Advanced School for Computing and Imaging. [details] 
  • Hoekstra, A. G., Grimminck, M. D., & Sloot, P. M. A. (1998). Large scale simulations of elastic light scattering by a fast dipole approximation. International journal of modern physics; C, 9(1), 87-102. [details] 
  • Hoekstra, A. G., Rahola, J., & Sloot, P. M. A. (1998). Internal fields in volume integral equation simulations of light scattering: accuracy and resonances. In M. I. Mishchenko, L. D. Travis, & J. W. Hovenier (Eds.), Proceedings of conference on light scattering by nonspherical particles: theory, measurements and applications (pp. 16-19). Boston: American Meteorological Society. [details] 
  • Hoekstra, A. G., & Sloot, P. M. A. (1998). A parallel fast discrete dipole approximation for large scale simulations of elastic light scattering. In B. M. ter Haar Romeny, D. H. J. Epema, & J. F. M. Tonino (Eds.), ASCI '98: proceedings of the fourth annual conference of the advanced school for computing and imaging, Lommel, Belgium, June 9-11, 1998 (pp. 73-79). Delft: Advanced School for Computing and Imaging. [details] 
  • Kandhai, B. D., Dubbeldam, D., Hoekstra, A. G., & Sloot, P. M. A. (1998). Lattice boltzmann hydrodynamics in centrifugal elutriation chambers. In B. M. ter Haar Romeny, D. H. J. Epema, & J. F. M. Tonino (Eds.), ASCI'98 : proceedings of the fourth annual conference of the Advanced School for Computing and Imaging, Lommel, Belgium, June 9-11, 1998 (pp. 269-274). Delft: Advanced School for Computing and Imaging. [details] 
  • Kandhai, B. D., Dubbeldam, D., Hoekstra, A. G., & Sloot, P. M. A. (1998). Parallel lattice-Boltzmann simulation of fluid flow in centrifugal elutration chambers. In P. M. A. Sloot, M. Bubak, & L. O. Hertzberger (Eds.), High-performance computing and networking (HPCN Europe '98), Amsterdam, The Netherlands (pp. 173-182). (Lecture notes in computer science; No. 1401). Berlin: Springer. [details] 
  • Sloot, P. M. A., Bubak, M. T., & Hertzberger, L. O. (1998). Proceedings High-Performance Computing and Networking (HPCN Europe '98), Amsterdam, The Netherlands. (Lecture Notes in Computer Science; No. 1401). Unknown Publisher.
  • Sloot, P. M. A., Bubak, M., & Hertzberger, L. O. (1998). High-performance computing and networking : international conference and exhibition, Amsterdam, The Netherlands, April 21-23, 1998 : proceedings. (Lecture Notes in Computer Science; No. 1401). Berlin: Springer. [details] 
  • Braan, J. M., Hoekstra, A. G., & Sloot, P. M. A. (1998). Prototyping an HPCNet distance learning environment: rationale and implementation. Amsterdam: Department of Computer Systems, University of Amsterdam. [details] 
  • Buchner, H., Kaiser, S., Sloot, P. M. A., Fuchs, M., & Wassmuth, K. (1998). EEG/MEG Quellen Rekonstruktion: die Funktionen von CURRY und CAUCHY-par. In T. Lehman, V. Metzler, & K. Spitzer (Eds.), Bildverarbeitung fuer die Medizin 1998: Algorithmen - Systeme - Anwendungen (pp. 455-459). Berlin: Springer. [details] 
  • van Halderen, A. W., Overeinder, B. J., Sloot, P. M. A., van Dantzig, R., Epema, D. H. J., & Livny, M. (1998). Hierarchical resource management in the polder metacomputing initiative. Parallel Computing, 24(12/13), 1807-1825. [details] 

1997

  • Hertzberger, L. O., & Sloot, P. M. A. (1997). Proceedings High-Performance Computing and Networking (HPCN Europe '97), Vienna, Austria. (Lecture Notes in Computer Science; No. 1225). Unknown Publisher.
  • Hertzberger, L. O., & Sloot, P. M. A. (1997). Proceedings high-performance computing and networking. (Lecture Notes in Computer Science; No. 1225). onbekend: onbekend. [details] 
  • Hoekstra, A. G., Hoffmann, W., Kartawidjaja, M. A., Overeinder, B. J., Santoso, J., & Sloot, P. M. A. (1997). A high performance simulation environment, project status report. Amsterdam: Departement of Computer Systems, University of Amsterdam. [details] 
  • Sloot, P. M. A., Schoneveld, A., de Ronde, J. F., & Kaandorp, J. A. (1997). Large scale simulations of complex systems part i: conceptual framework. (Technical Report SFI Working Paper; No. 97-07-070). Santa Fe Institute for Complex studies. [details] 
  • de Ronde, J. F., Schoneveld, A., & Sloot, P. M. A. (1997). Load balancing by redundant decomposition and maping. Future Generation Computer Systems, 12(5), 391-407. DOI: 10.1016/S0167-739X(97)83341-9  [details] 

1996

  • Kaandorp, J. A., & Sloot, P. M. A. (1996). Modelling diffusion and flow limited morphogenesis of marine sessile organisms. In 3rd European conference of mathematics applied to biology and medicine (abstract) [details] 
  • Kandhai, B. D., Sloot, P. M. A., & Huot, J. P. (1996). Constrained migration of an atmospheric circulation model. In HPCN Europe '96 Conference [details] 
  • Overeinder, B. J., Sloot, P. M. A., Heederik, R. N., & Hertzberger, L. O. (1996). A Dynamic Load Balancing System for Parallel Cluster Computing. In Future Generation Computer Systems [details] 
  • Sloot, P. M. A. (1996). Editorial: Resource Management in Distributed Systems. Future Generation Computer Systems, 12, 1-2. DOI: 10.1016/0167-739X(95)00030-V  [details] 
  • de Ronde, J. F., Schoneveld, A., & Sloot, P. M. A. (1996). Properties of the Task Allocation Problem. (Technical Report; No. CS-96-03). onbekend: onbekend (FdL). [details] 
  • Liddell, H., Colbrook, A., Hertzberger, L. O., & Sloot, P. M. A. (1996). Proceedings High-Performance Computing and Networking (HPCN Europe '96), Brussels, Belgium. (Lecture Notes in Computer Science; No. 1067). Unknown Publisher.
  • Liddell, H., Colbrook, A., Hertzberger, L. O., & Sloot, P. M. A. (1996). Proceedings high-performance computing and networking. (Lecture Notes in Computer Science; No. 1067). Berlin: Springer. [details] 

1995

  • Bergman, M., & Sloot, P. M. A. (1995). IPS Technical Report. (Technical Report CAMAS; No. TR-2.1.2.4). onbekend: onbekend (FdL). [details] 
  • Bergman, M., & Sloot, P. M. A. (1995). Domain Decomposition by Parallel and Weighted RSB. In J. J. Gerbrands, J. van Katwijk, M. R. van Steed, & J. F. M. Tonino (Eds.), ASCI'95 Proceedings of the first annual conference of the Advanced School for Computing and Imaging, Heijen, The Netherlands, May 16-18, 1995 (pp. 368-376) [details] 
  • Bergman, M., Hoffmann, W., & Sloot, P. M. A. (1995). IPS Final Report. (Technical Report CAMAS; No. TR-2.1.2.5). onbekend: onbekend (FdL). [details] 
  • Hoekstra, A. G., & Sloot, P. M. A. (1995). Development of parallel hierarchical methods. In PowerXplorer user report (pp. 70-76). Aachen: Parsytec. [details] 
  • Hoekstra, A. G., & Sloot, P. M. A. (1995). Simulating elastic light scattering. In PowerXplorer User report: 1st edition (pp. 65-69). Aachen: Parsytec. [details] 
  • Hoekstra, A. G., Sloot, P. M. A., & Hertzberger, L. O. (1995). Comparing the Parix and PVM parallel programming environments. In J. J. Gerbrands, J. van Katwijk, M. R. van Steen, & J. F. M. Tonino (Eds.), ASCI '95: Proceedings of the first annual conference of the Advanced School for Computing and Imaging (pp. 288-292)
  • Hoekstra, A. G., Sloot, P. M. A., & Hertzberger, L. O. (1995). Comparing the Parix and PVM parallel programming environments. In L. Finmo, & P. Fritzon (Eds.), Proceedings of the Workshop on Parallel Programming and Computation (ZEUS '95) and the 4th Nordic Transputer Conference (NTUG '95) (pp. 13-17). Amsterdam, Oxford, Tokyo, Washington DC: IOS Press. [details] 
  • Kaandorp, J. A., & Sloot, P. M. A. (1995). Parallel solvers for simulating morphogenesis. (PowerXplorer User Report). Parsytec Computer GmbH. [details] 
  • Kaandorp, J. A., & Sloot, P. M. A. (1995). A parallel hybrid solver for diffusion limited growth. In L. Finmo, & P. Fritzon (Eds.), Parallel Programming and Applications Proceedings of the Workshop on Parallel Programming and Computation (ZEUS '95) and the 4th Nordic Transputer Conference (NTUG '95) (pp. 254-258). Amsterdam: IOS Press. [details] 
  • Overeinder, B. J., & Sloot, P. M. A. (1995). Parallel Discrete Event Simulation Performance Modeling and Evaluation. (Technical Report; No. 2nd ed.). Dusseldorf: Universitatsrechenzentrum, Heinrich-Heine-Universitat. [details] 
  • Overeinder, B. J., & Sloot, P. M. A. (1995). Parallel Performance Evaluation through Critical Path Analysis. In G. Serazzi, & B. Hertzberger (Eds.), High-Performance Computing and Networking (HPCN Europe '95) (pp. 634-639). (LNCS; No. 919). Springer-Verlag. [details] 
  • Overeinder, B. J., Vesseur, J. J. J., van der Linden, F., & Sloot, P. M. A. (1995). A Communication Kernel for Parallel Programming Support on a Massively Parallel Processor System. In J. J. Gerbrands, J. van Katwijk, M. R. Steen, & J. F. M. Tonino (Eds.), Proceedings of the first annual conference of the Advanced School for Computing and Imaging (pp. 157-164) [details] 
  • Overeinder, B. J., Vesseur, J. J. J., van der Linden, F., & Sloot, P. M. A. (1995). A Communication Kernel for Parallel Programming Support on a Massively Parallel Processor System. In L. Finmo, & P. Fritzon (Eds.), Proceedings of the Workshop on Parallel Programming and Computation (ZEUS'95) and the 4th Nordic Transputer Conference (NTUG'95) (pp. 259-266). Amsterdam: IOS Press. [details] 
  • Pimentel, A. D., van Brummen, J., Papathanassiadis, T., Sloot, P. M. A., & Hertzberger, L. O. (1995). Mermaid: modelling and evaluation research in MIMD architecture design. Amsterdam: Department of Computer Systems, University of Amsterdam. [details] 
  • Pimentel, A. D., Hertzberger, L. O., & Sloot, P. M. A. (1995). Mermaid: modelling and evaluation research in MIMD Architecture design. (PowerXplorer User report). Aachen: Parsytec. [details] 
  • Pimentel, A. D., Hertzberger, L. O., & Sloot, P. M. A. (1995). Modelling and Evaluation Research in mimd Architecture Design (Mermaid). In P. Schreiber, & J. Knop (Eds.), PowerXplorer User Report (pp. 221-227). Universiteit Dusseldorf. [details] 
  • Pimentel, A. D., van Brummen, J., Papathanassiadis, T., Sloot, P. M. A., & Hertzberger, L. O. (1995). Mermaid: Modelling and Evaluation Research in mimd Architecture Design. In G. Serazzi, & L. O. Hertzberger (Eds.), Proc. of the High Performance Computing and Networking Conference (pp. 335-340). (Lecture Notes in Computer Science; No. 919). Berlin: Springer Verlag. [details] 
  • Schoneveld, A., Kaandorp, J. A., & Sloot, P. M. A. (1995). Parallel Dynamic Complex Systems. (Technical Report). Parsytec Computer GmbH. [details] 
  • Sloot, P. M. A. (1995). Computational Physics: Stochastic Simulation. (Technical Report; No. CS-95-06). onbekend: onbekend (FdL). [details] 
  • Sloot, P. M. A. (1995). Guest Editorial: Massive Parallel Computing. Future Generation Computer Systems, 11, 113-114. DOI: 10.1016/0167-739X(94)00051-F  [details] 
  • Sloot, P. M. A., & Voogd, J. M. (1995). Simulated annealing: A trade-off between vector and parallel implementations. In L. Finmo, & P. Fritzon (Eds.), Transputer and Occam Engineering Series, Parallel Programming and Applications (pp. 267-274). IOS Press. [details] 
  • Sloot, P. M. A., Kaandorp, J. A., & Schoneveld, A. (1995). Dynamic Complex Systems (DCS): A New Approach to Parallel Computing in Computational Physics. (Technical Report; No. CS-95-08). onbekend: onbekend (FdL). [details] 
  • Vesseur, J. J. J., Heederik, R. N., Overeinder, B. J., & Sloot, P. M. A. (1995). Experiments in Dynamic Load Balancing for Parallel Cluster Computing. In J. J. Gerbrands, J. van Katwijk, M. R. Steen, & J. F. M. Tonino (Eds.), Proceedings of the first annual conference of the Advanced School for Computing and Imaging (pp. 417-421) [details] 
  • Vesseur, J. J. J., Heederik, R. N., Overeinder, B. J., & Sloot, P. M. A. (1995). Experiments in Dynamic Load Balancing for Parallel Cluster Computing. In L. Finmo, & P. Fritzon (Eds.), Proceedings of the Workshop on Parallel Programming and Computation (ZEUS'95) and the 4th Nordic Transputer Conference (NTUG'95) (pp. 189-194). Amsterdam: IOS Press. [details] 
  • Voogd, J. M., & Sloot, P. M. A. (1995). Simulated Annealing: Comparison of Vector and Parallel Implementations. In J. J. Gerbrands, J. van Katwijk, M. R. van Steen, & J. F. M. Tonino (Eds.), ASCI'95 Proceedings of the first annual conference of the Advanced School for Computing and Imaging (pp. 213-222) [details] 
  • Voogd, J. M., Sloot, P. M. A., van Dantzig, R., & Frenkel, D. (1995). Crystallization on a Sphere. (Technical Report). University of Dusseldorf and Parsytec. [details] 
  • de Ronde, J. F., & Sloot, P. M. A. (1995). CAMAS-TR-2.1.3.3 MAP progress report. (Technical Report). onbekend: onbekend (FdL). [details] 
  • de Ronde, J. F., & Sloot, P. M. A. (1995). Concepts of Meta Modelling: A case study of code development for distributed memory architectures. In J. J. Gerbrands, J. van Katwijk, M. R. van Steen, & J. F. M. Tonino (Eds.), Proceedings of the first annual conference of the Advanced School for Computing and Imaging, Heijen, The Netherlands (pp. 175-184). Advanced School for Imaging and Computing. [details] 
  • de Ronde, J. F., Schoneveld, A., Overeinder, B. J., & Sloot, P. M. A. (1995). MAP Final Report. (ESPRIT III-CEC CAMAS; No. TR-2.1.3.4). onbekend: onbekend (FdL). [details] 
  • de Ronde, J. F., van Halderen, A. W., & Sloot, P. M. A. (1995). CAMAS-TR-2.3.5.1 User Scenario UvA tools. (Technical Report). onbekend: onbekend (FdL). [details] 
  • van Halderen, A. W., Sloot, P. M. A., & Vesseur, J. J. J. (1995). Parasol/SAD Final Report. (Technical Report CAMAS; No. TR-2.1.1.7). onbekend: onbekend (FdL). [details] 
  • van Halderen, A. W., de Ronde, J. F., & Sloot, P. M. A. (1995). F2SAD - prediction capabilities. (Technical Report CAMAS; No. TR-2.2.4.6). onbekend: onbekend (FdL). [details] 
  • van Halderen, A. W., de Ronde, J. F., & Sloot, P. M. A. (1995). Memory requirements of F2SAD. (Technical Report CAMAS; No. TR-2.2.4.5). onbekend: onbekend (FdL). [details] 
  • van Halderen, A. W., de Ronde, J. F., & Sloot, P. M. A. (1995). SAD/Parasol II, Joined Report. (Technical Report CAMAS; No. TR-2.1.1.6). onbekend: onbekend (FdL). [details] 
  • Overeinder, B. J., & Sloot, P. M. A. (1995). Parallel discrete event simulation performance modelling and evaluation. In PowerXplorer User report; 1st edition (pp. 137-144). Aachen: Parsytec. [details] 
  • Schoneveld, A., Kaandorp, J. A., & Sloot, P. M. A. (1995). Parallel dynamical complex systems. In PowerXplorer user report: 1st edition (pp. 152-156). Aachen: Parsytec. [details] 

1994

  • Hoekstra, A. G., & Sloot, P. M. A. (1994). New Computational Techniques to Simulate Light Scattering from Arbitrary Particles. Particle & Particle Systems Characterization, 11, 189-193. DOI: 10.1002/ppsc.19940110304  [details] 
  • Sloot, P. M. A. (1994). Modelling and simulation. Amsterdam: Department of Computer Systems, University of Amsterdam. [details] 
  • Sloot, P. M. A. (1994). Modelling and Simulation. In Proceedings of the 1994 {CERN} School of Computing (pp. 177-226) [details] 
  • Sloot, P. M. A., Hoekstra, A. G., & Hertzberger, L. O. (1994). A Comparison of the Iserver-Occam, Parix, Express, and PVM Programming Environments on a Parsytec GCel. In U. Harms, & W. Gentzsch (Eds.), High Performance Computing and Networking, Volume II Networking and Tools (pp. 253-259). (LNCS; No. 797). Berlin: Springer Verlag. [details] 
  • Voogd, J. M., Dantzig, R., & Sloot, P. M. A. (1994). Two-dimensional Crystallisation on spherical surfaces. In M. Tomassini, & R. Gruber (Eds.), Proceedings of the 6th joint EPS-APS International Conference on Physics Computing (pp. 463-466). Geneva, Switzerland: European Physical Society. [details] 
  • Voogd, J. M., Sloot, P. M. A., & Dantzig, R. (1994). Crystallization on a Sphere. Future Generation Computer Systems, 10(2/3), 359-361. DOI: 10.1016/0167-739X(94)90043-4  [details] 
  • Voogd, J. M., Sloot, P. M. A., & Dantzig, R. (1994). Simulated Annealing for N-body Systems. In U. Harms, & W. Gentzsch (Eds.), High Performance Computing and Networking, Volume I:Applications (pp. 293-298). (LNCS; No. 796). Berlin: Springer Verlag. [details] 
  • de Ronde, J. F., Sloot, P. M. A., Beemster, M., & Hertzberger, L. O. (1994). The CAMAS workbench: Computer Aided Migration of Applications System. Future Generation Computer Systems, 10(2/3), 305-308. DOI: 10.1016/0167-739X(94)90034-5  [details] 
  • de Ronde, J. F., van Halderen, A. W., de Mes, A., Beemster, M., & Sloot, P. M. A. (1994). Automatic Performance Estimation of SPMD Programs on MPP. In W. Smit, L. Dekker, & J. C. Zuidervaart (Eds.), Massively Parallel Applications and Development (pp. 381-388). Amsterdam: Elsevier. [details] 
  • Bergman, M., Hoffman, W., & Sloot, P. M. A. (1994). IPS progress report. (CAMAS Technical Report; No. TR-2.1.2.3). Amsterdam: Department of Computer Systems, University of Amsterdam. [details] 
  • Bergman, M., & Sloot, P. M. A. (1994). IPS position paper: preconditioning for the conjugate gradient method. (CAMAS Technical Report; No. TR-2.1.2.2). Amsterdam: Department of Computer Systems, University of Amsterdam. [details] 
  • Dikken, L., van der Linden, F., Vesseur, J. J. J., & Sloot, P. M. A. (1994). DynamicPVM: Dynamic Load Balancing on Parallel Systems. In U. Harms, & W. Gentzsch (Eds.), High Performance Computing and Networking, Volume II Networking and Tools (pp. 273-277). (LNCS; No. 797). Berlin: Springer Verlag. [details] 
  • Doornbos, R. M. P., Hoekstra, A. G., Deurloo, K. E. I., de Grooth, B. G., Sloot, P. M. A., & Greve, J. (1994). Lissajous-Like Patterns in Scatter Plots of Calibration Beads. Cytometry, 16, 236-242. DOI: 10.1002/cyto.990160307  [details] 
  • Overeinder, B. J., Sloot, P. M. A., & Petersen, J. (1994). Finalization report: homogeneous PVM/PARIX. (CAMAS Technical Report; No. TR 2.3.4). Amsterdam: Department of Computer Systems, University of Amsterdam. [details] 
  • de Mes, A., Beemster, M., de Ronde, J. F., & Sloot, P. M. A. (1994). arasol I technical report. (CAMAS Technical Report; No. TR-2.1.1.4). Amsterdam: Department of Computer Systems, University of Amsterdam. [details] 
  • de Mes, A., & Sloot, P. M. A. (1994). Presentation on the status of Parasol. (CAMAS Technical Report; No. TR 2.1.1.5). Amsterdam: Department of Computer Systems, University of Amsterdam. [details] 
  • de Ronde, J. F., Bergman, M., & Sloot, P. M. A. (1994). MAP position paper. (CAMAS Technical Report; No. TR 2.1.3.1). Amsterdam: Department of Computer Systems, University of Amsterdam. [details] 
  • de Ronde, J. F., & Sloot, P. M. A. (1994). Map design report. (CAMAS Technical Report; No. TR-2.1.3.2). Amsterdam: Department of Computer Systems, University of Amsterdam. [details] 
  • van Halderen, A. W., de Ronde, J. F., Beemster, M., & Sloot, P. M. A. (1994). SAD progress report. (CAMAS Technical Report; No. TR-2.2.4.4). Amsterdam: Department of Computer Systems, University of Amsterdam. [details] 
  • van Halderen, A. W., de Ronde, J. F., Beemster, M., & Sloot, P. M. A. (1994). SAD technical report. (CAMAS Technical Report; No. TR-2.2.4.3). Amsterdam: Department of Computer Systems, University of Amsterdam. [details] 
  • van der Linden, F., Petersen, J., & Sloot, P. M. A. (1994). PVM/PARIX progress report. (CAMAS Technical Report; No. TR 2.3.3). Amsterdam: Department of Computer Systems, University of Amsterdam. [details] 

1993

  • Hoekstra, A. G., Doornbos, R. M. P., Deurloo, K. E. I., Noordmans, H. J., de Grooth, B. G., & Sloot, P. M. A. (1993). An unexpected signature of Lorenz-Mie scattering observed in flowcytometric experiments. In M. Maeda (Ed.), The 3rd international congress on optical particle sizing '93 (pp. 153-158). Yokohama. [details] 
  • Hoekstra, A. G., & Sloot, P. M. A. (1993). Dipolar unit size in coupled dipole calculations of the scattering matrix elements. Optics Letters, 18, 1211-1213. DOI: 10.1364/OL.18.001211  [details] 
  • Hoekstra, A. G., & Sloot, P. M. A. (1993). New computational techniques to simulate light scattering from arbitrary particles. In M. Maeda (Ed.), The 3rd international congress on optical particle sizing (pp. 167-172). Yokohama. [details] 
  • Hoekstra, A. G., & Sloot, P. M. A. (1993). Simulating elastic light scattering using high performance computing methods. In A. Verbraeck, & E. J. H. Kerckhoffs (Eds.), European simulation symposium 1993 (pp. 462-467). San Diego; Delft: Society for Computer Simulation International. [details] 
  • Sloot, P. M. A., & Reeve, J. F. (1993). The CAMAS workbench. (CAMAS Technical Report; No. TR-2.3.1.1). Amsterdam, Southampton: University of Amsterdam. [details] 
  • Sloot, P. M. A., Voogd, J. M., de Kanter, D., & Hertzberger, L. O. (1993). Simulated annealing: comparison of vector and parallel implementations. (Technical report; No. CS-06-93). Amsterdam: Department of Computer Systems, University of Amsterdam. [details] 
  • Sloot, P. M. A., ter Laak, A., Pandolfi, P., van Dantzig, R., & Frenkel, D. (1993). Crystallization on a sphere. In R. A. de Groot, & E. J. Nadrachal (Eds.), The 4th international conference physics computing (pp. 471-472). Singapore, Prague: World Scientific. [details] 
  • Sloot, P. M. A., & Hertzberger, L. O. (1993). PERFORM. Amsterdam: Department of Computer Systems, University of Amsterdam. [details] 
  • Sloot, P. M. A., & Hoekstra, A. G. (1993). Light scattering simulations on a massively parallel computer at the IC3A. Transputer Applications, 1, 42-49. [details] 
  • Bergman, M., & Sloot, P. M. A. (1993). BLAS: Basic linear algebra subsystems. (CAMAS Technical Report; No. 2.1.2.1). Amsterdam: Department of Computersystems, University of Amsterdam. [details] 
  • Doornbos, R. M. P., Hoekstra, A. G., Deurloo, K. E. I., de Grooth, B. G., Sloot, P. M. A., & Greve, J. (1993). Polarization measurements in a flow cytometer: Lissajous patterns in scatter plots of calibration beads. Cytometry, suppl. 6. [details] 
  • Lonsdale, G., Clinckemaillie, J., Vlachoutsis, S., de Ronde, J. F., Sloot, P. M. A., & Floros, N. (1993). Crashworthiness simulation migration to distributed memory and MIMD machines. In The 26th international symposium on automotive technology and automation (pp. 237-244). Croydon: Automotive Automation Limited. [details] 
  • Overeinder, B. J., & Sloot, P. M. A. (1993). Application of time warp to parallel simulations with asynchronous cellular automata. In A. Verbraeck, & E. J. H. Kerkchoffs (Eds.), European simulation symposium 1993 (pp. 397-402). Delft: Society for Computer Simulation International. [details] 
  • Voogd, J. M., & Sloot, P. M. A. (1993). Crystallization on a sphere using the simulated annealing algorithm implemented on H.P.C. systems. In A. Verbraeck, & E. J. H. Kerckhoffs (Eds.), European simulation symposium (pp. 371-376). Delft: Society for Computer Simulation International. [details] 
  • de Mes, A., & Sloot, P. M. A. (1993). Parasol I progress report. (CAMAS Technical Report; No. TR-2.1.1.3). Amsterdam: Department of Computer Systems, University of Amsterdam. [details] 
  • de Ronde, J. F., Bergman, M., Trenning, P., & Sloot, P. M. A. (1993). Application simulator. (CAMAS Technical Report; No. TR-2.1.1.2). Amsterdam: Department of Computer Systems, University of Amsterdam. [details] 
  • de Ronde, J. F., van Halderen, A. W., Beemster, M., & Sloot, P. M. A. (1993). SAD/Parasol II progress report. (CAMAS Technical Report; No. TR-2.2.4.2). Amsterdam: Department of Computer Systems, University of Amsterdam. [details] 
  • de Ronde, J. F., & Sloot, P. M. A. (1993). Parasol I&II position paper. (CAMAS Technical Report; No. TR-2.1.1.1). Amsterdam: Dept. of computer Systems, University of Amsterdam. [details] 
  • de Ronde, J. F., & Sloot, P. M. A. (1993). SAD position paper. (CAMAS Technical Report; No. TR-.2.2.4.1). Amsterdam: Dept. of computer Systems, University of Amsterdam. [details] 
  • de Ronde, J. F., & Sloot, P. M. A. (1993). A simulation methodology for the prediction of SPMD programs performance. In A. Verbraeck, & E. J. H. Kerckhoffs (Eds.), European simulation symposium (pp. 24-25). Delft: Society for Computer Simulation International. [details] 

1992

  • Belleman, R. G., Sloot, P. M. A., & Hertzberger, L. O. (1992). Multivariate data processing system: transputer based data acquisition, analysis and presentation. In M. Valero (Ed.), Parallel computing and transputer applications (PACTA 92) (pp. 1147-1155). Amsterdam [etc.]: IOS Press. [details] 
  • Sloot, P. M. A., ter Laak, A., Pandolfi, P., & van Dantzig, R. (1992). Crystallization on a sphere: parallel simulation on a transputer network. Computer in physics, 6, 307. [details] 
  • Sloot, P. M. A., & Hoekstra, A. G. (1992). Implementation of a parallel conjugate gradient method for simulation of elastic light scattering. Computer in physics, 6, 323. [details] 
  • Sloot, P. M. A., Hoekstra, A. G., Hoffmann, W., & Hertzberger, L. O. (1992). Time complexity of a parallel conjugate gradient solver for light scattering simulations: theory and SPMD implementation. Amsterdam: Dept. of comp. sys., University of Amsterdam. [details] 
  • Graaff, R., Aarnoudse, J. G., Zijp, J. R., Sloot, P. M. A., de Mul, F. F. M., & Greve, J. (1992). Reduced light-scattering properties for mixtures off spherical particles: a simple approximation derived from Mie calculations. Applied Optics, 31(10), 1370-1376. DOI: 10.1364/AO.31.001370  [details] 
  • Overeinder, B. J., Sloot, P. M. A., & Hertzberger, L. O. (1992). Time warp on a transputer platform: pilot study with asynchronous cellular automata. In M. Valero (Ed.), Parallel computing and transputer applications (PACTA 92) (pp. 1303-1312). (Transputer and OCCAM engineering series; No. 28/29). Amsterdam [etc.]: IOS Press. [details] 
  • ter Laak, A., Hertzberger, L. O., & Sloot, P. M. A. (1992). Nonconvex continuous optimization experiments on a transputer system. In A. Allen (Ed.), Transputer systems : ongoing research (pp. 251-265). (Transputer and OCCAM Engineering; No. 25). Amsterdam [etc.]: IOS Press. [details] 
  • van Muiswinkel, M., Trip, L. H., & Sloot, P. M. A. (1992). Parallel sound synthesis: parallel sonification of multivariate data on a transputer platform. In M. Valero (Ed.), Parallel computing and transputer applications (PACTA 92) (pp. 1156-1164). (Transputer and OCCAM engineering series; No. 28/29). Amsterdam [etc.]: IOS Press. [details] 

1991

  • Hoekstra, A. G., Hertzberger, L. O., & Sloot, P. M. A. (1991). Simulation of elastic light scattering on distributed memory machines: abstract. Bulletin of the American Physical Society, 36, 1798. [details] 
  • Hoekstra, A. G., Sloot, P. M. A., Haan, M. J., & Hertzberger, L. O. (1991). Time complexity analysis for distributed memory computers: implementation of parallel conjugate gradient method. In J. van Leeuwen (Ed.), Computing Science in the Netherlands : jaarbeurs Utrecht 7 en 8 november 1991 : proceedings (pp. 249-266). Amsterdam: Stichting Mathematisch Centrum. [details] 
  • Overeinder, B. J., Hertzberger, L. O., & Sloot, P. M. A. (1991). Parallel discrete event simulation. In W. J. Withagen (Ed.), Proceedings of the third workshop computersystems (pp. 19-30). Eindhoven: Faculty of Electrical Engineering, Eindhoven University. [details] 

1990

  • Sloot, P. M. A., & Hoekstra, A. G. (1990). Morphological characteristics of nucleated bloodcells studied by elastic light scattering. In E. D. Hirleman (Ed.), Proceedings of the 2nd international congress on optical particle sizing (pp. 382-394). Tempe: Arizona State University. [details] 

1989

  • Sloot, P. M. A., Carels, M. J., & Hoekstra, A. G. (1989). CACE: a case of embedded system development. In P. M. G. Apers, & J. van Leeuwen (Eds.), Computing science in the Netherlands (pp. 441-462). Amsterdam: CWI. [details] 
  • Sloot, P. M. A., van der Liet, H., Hoekstra, A. G., & Figdor, C. G. (1989). Scattering matrix elements of biological particles measured in a flow through system: theory and practice. Applied Optics, 28(10), 1752-1762. DOI: 10.1364/AO.28.001752  [details] 

1987

  • Sloot, P. M. A., Carels, M. J., Tensen, P., & Figdor, C. G. (1987). Computer assisted centrifugal elutriation I: detection system and data acquisition equipment. Computer Methods and Programs in Biomedicine, 24(3), 179-188. DOI: 10.1016/0169-2607(87)90030-7  [details] 
  • Sloot, P. M. A., van der Donk, E. H. M., & Figdor, C. G. (1987). Computer assisted centrifugal elutriation II: multiparametric statistical analysis. Computer Methods and Programs in Biomedicine, 27(1), 37-46. DOI: 10.1016/0169-2607(88)90101-0  [details] 

1986

2011

2010

2008

  • Rycerz, K., Bubak, M., Sloot, P. M. A., & Getov, V. (2008). HLA component based environment for distributed multiscale simulations. (CoreGRID technical report; No. TR-0137). CoreGRID Institute on Grid Systems, Tools, and Environments. [details] 

2005

  • Sloot, P. M. A., Kaandorp, J. A., Hoekstra, A. G., Ayache, N., Boissel, J-P., Brunak, S., ... Viceconti, M. (2005). Towards Virtual Physiological Human: multilevel modelling and simulation of the human anatomy and phsyiology. Unknown Publisher.

2004

  • Sloot, P. M. A., & Hoekstra, A. G. (2004). Virtual Vascular Surgery on the Grid. ERCIM News, 59, 50-51. [details] 

1999

  • Sloot, P. M. A. (1999). De som der delen - inaugural address. (Oratiereeks ; 7). Amsterdam: Vossiuspers AUP. [details] 

1998

  • Braan, J. M., Hoekstra, A. G., & Sloot, P. M. A. (1998). Prototyping an HPCNet Distance Learning Environment: Rationale and Implementation. Amsterdam: WINS (oud WINS). [details] 

2013

  • Sloot, P. M. A. Leading Scientist Award

2012

  • Erdbrink, C. D., Krzhizhanovskaya, V. V., & Sloot, P. M. A. (2012). Controlling flow-induced vibrations of flood barrier gates with data-driven and finite-element modelling. 102-103. Abstract from 2nd European Conference on FLOODrisk Management, .

2011

  • Botman, D., Kaandorp, J. A., & Sloot, P. (2011). An integrated approach to infer the gene network in early development of the cnidarian Nematostella venctensis. 101. Poster session presented at International Workshop: Searching for Eve, .
  • Sloot, P. M. A. Multi-scale modelling of the Infectious Diseases
  • Sloot, P. M. A. Peter Sloot meets President Medvedev

2010

  • Krzhizhanovskaya, V., Korkhov, V., Moscicki, J. T., & Sloot, P. M. A. (2010). Dynamic workload balancing with user-level scheduling for parallel applications on heterogeneous Grid resources. Abstract from HPC 2010, "High Performance Computing, GRIDS and clouds", An International Advanced Workshop, .

2009

  • Sloot, P. M. A. Complex Networks in Solid Tumour Metastatsis
  • Sloot, P. M. A. Computer Model HIV
  • Sloot, P. M. A. Computer Model HIV
  • Sloot, P. M. A. Computer Model HIV
  • Sloot, P. M. A. Computer Model HIV
  • Sloot, P. M. A. Software voorziet rampen

2008

  • Sloot, P. M. A. 'Computational eScience'
  • Sloot, P. M. A. 'VIROLAB: a virtual laboratory for infectious diseases'
  • Sloot, P. M. A. Complex Networks as modeling paradigm for complex systems
  • Sloot, P. M. A. Multi-scale modeling of HIV dynamics using a Gridbased System-level approach
  • Sloot, P. M. A. The Virtual Physiological Human: 'Virolab: Modeling Infectious Diseases'
  • Ó Nualláin, B., van de Vijver, D., Boucher, C., Tirado Ramos, A., & Sloot, P. (2008). Enhanced decision support for HIV drug resistance interpretation. Reviews in Antiviral Therapy, 2008-2.

2007

  • Sloot, P. M. A. 'Multi-scale modeling of HIV dynamics using a Gridbased System-level approach'
  • Sloot, P. M. A. Bio computing: The challenge of the Scales
  • Sloot, P. M. A. Drug ranking by molecular modeling
  • Sloot, P. M. A. The Virolab Virtual Laboratory
  • Sloot, P. M. A. The molecule to man machine'
  • Sloot, P. M. A. eScience in a real world

2006

  • Sloot, P. M. A. Invited Lecture: Modeling Multi-Cellular Organisms with Distributed Cellular Automata
  • Sloot, P. M. A. Multiscale Modeling and Simulation
  • Sloot, P. M. A. The Virolab Virtual Laboratory
  • Sloot, P. M. A. Time warping simulations

2005

  • Sloot, P. M. A. The Virolab Virtual Laboratory

2004

  • Sloot, P. M. A. BioGrid
  • Sloot, P. M. A. Dynamite: Explosive solutions to resource sharing
  • Sloot, P. M. A. Modeling Infectious Diseases
  • Sloot, P. M. A. Simulating distributed correlated particle systems

2003

  • Sloot, P. M. A. Modeling Complex Systems
  • Sloot, P. M. A. Scientific Visualization and Virtual Reality

2002

  • Sloot, P. M. A. A Multi-modal Interface for an Interactive Simulated Vascular Reconstruction System
  • Sloot, P. M. A. Advanced Computer Modeling and Simulation
  • Sloot, P. M. A. CrossGrid
  • Sloot, P. M. A. Dynamic task migration on the Grid
  • Sloot, P. M. A. High performance computing and Grids
  • Sloot, P. M. A. Interactive Simulation and Visualization of Bloodflow
  • Sloot, P. M. A. Interactive visualisation

2001

  • Sloot, P. M. A. Emergence and SelfOrganisation
  • Sloot, P. M. A. Interactieve Numerieke Natuurkunde
  • Sloot, P. M. A. Risico analyse door Computer Simulatie

2000

  • Sloot, P. M. A. Computing 2020: A Simulation Perspective
  • Sloot, P. M. A. Modeling Multi-Cellular Organisms with Distributed Cellular Automata
  • Sloot, P. M. A. Modelling with Cellular Automata
  • Sloot, P. M. A. Self-Organized Criticality in Simulation of Correlated Systems

Award

  • Sloot, P. M. A. (2010). Leading Scientist Award November 2010.
  • Zarrabi, N., Mancini, E., Tay, J. C., Shahand, S. & Sloot, P. M. A. (2010). Modeling HIV-1 intracellular replication: two simulation approaches.
  • Sloot, P. M. A. (2009). DISTINGUISHED SERVICE AWARD "In Recognition and Appreciation of His Outstanding Service to The Profession of Computer Science and Applied Computing".
  • Sloot, P. M. A. (2009). World Comp Service Award.
  • Sloot, P. M. A. (2009). I/O Award Dutch ICT SIREN 2009.
  • Sloot, P. M. A. (2008). Cheng Tsang Man visiting professor award.
  • Sloot, P. M. A. (2008). NAKFI award.

Scientific position

  • Sloot, P. M. A. (2010). Visiting Professor Nanyang University of Technology (NTU), Singapore, Visiting Professor Nanyang University of Technology (NTU), Singapore.
  • Sloot, P. M. A. (2010-2011). Visiting Professor St. Petersburg State University, Russia, St. Petersburg State University, Russia.
  • Sloot, P. M. A. (2008). Scientific advisor, Wetenschappelijke Advies Raad Stichting SURF.
  • Sloot, P. M. A. (2008). Scientific advisor, Lorentz Center, Universiteit Leiden.
  • Sloot, P. M. A. (2008). Scientific advisor, AgH University of Science and Technology, Krakow, Poland.
  • Sloot, P. M. A. (2008). Scientific advisor, UK e-Science Strategic Advisory Team.
  • Sloot, P. M. A. (2008). Scientific advisor, NIP: Nederlands Instituut in St. Peterburg.
  • Sloot, P. M. A. (2008). Scientific advisor, Russian Academy of Science.
  • Sloot, P. M. A. (2008). Scientific advisor, Informatica Kamer Nederland.
  • Sloot, P. M. A. (2007). Scientific advisor, Informatica Kamer Nederland.
  • Sloot, P. M. A. (2007). Scientific advisor, Lorentz Center, Universiteit Leiden.
  • Sloot, P. M. A. (2007). Scientific advisor, Advies Raad Stichting SURF.
  • Sloot, P. M. A. (2007). Scientific advisor, NIP: Nederlands Instituut in St. Peterburg, Russia.
  • Sloot, P. M. A. (2007). Scientific advisor, AgH University of Science and Technology, Krakow, Poland.
  • Sloot, P. M. A. (2007). Scientific advisor, UK e-Science Strategic Advisory Team.
  • Sloot, P. M. A. (2007). Scientific advisor, Russian Academy of Sciences.
  • Sloot, P. M. A. (2006). Scientific advisor, Informatica Kamer Nederland.
  • Sloot, P. M. A. (2006). Scientific advisor, AgH University of Science and Technology, Krakow, Poland.
  • Sloot, P. M. A. (2006). Scientific advisor, Russian Academy of Sciences.
  • Sloot, P. M. A. (2006). Scientific advisor, Lorentz Center, Universiteit Leiden.
  • Sloot, P. M. A. (2006). Scientific advisor, NIP: Nederlands Instituut in St. Peterburg.
  • Sloot, P. M. A. (2005). Scientific advisor Wetenschappelijke Advies Raad Stichting SURF, Stichting SURF.
  • Sloot, P. M. A. (2005). Visiting Professorship Nanyang Technological University, Nanyang Technological University.
  • Sloot, P. M. A. (2005). Scientific adviser NIP, Nederlands Instituut in St. Peterburg.
  • Sloot, P. M. A. (2005). Scientific advisor Lorentz Center, Universiteit Leiden, Leiden.
  • Sloot, P. M. A. (2005). Visiting Professorship Griffith University (Brisbane, Australia), Griffith University.

Media appearance

  • Sloot, P. (17-02-2013). Criminal Network Intervention Models [Television]. Criminal Network Intervention Models.
  • Sloot, P. (01-01-2013). Science and Education in Singapore [Print]. Science and Education in Singapore.
  • Sloot, P. (01-01-2012). Complex Systems [Print]. Complex Systems.
  • Sloot, P. (01-01-2012). De Mexicogriep hield toch harder huis [Print]. De Mexicogriep hield toch harder huis.
  • Sloot, P. (01-01-2012). Modellen voor de Pillen Pauze [Print]. Modellen voor de Pillen Pauze.
  • Sloot, P. (01-01-2012). De wetenschap van Skolkovo [Print]. De wetenschap van Skolkovo.
  • Sloot, P. (01-01-2012). Silicon Valley Skolkovo [Print]. Silicon Valley Skolkovo.
  • Sloot, P. (01-01-2011). Poetin Prijs [Print]. Poetin Prijs.
  • Sloot, P. (01-01-2011). Toekomst voorspellen met slijmzwammen [Print]. Toekomst voorspellen met slijmzwammen.
  • Sloot, P. (01-01-2011). Opening Advanced Computing Laboratory [Print]. Opening Advanced Computing Laboratory.
  • Sloot, P. (01-01-2011). De rekenregels van de natuur [Print]. De rekenregels van de natuur.
  • Sloot, P. (01-01-2011). De ICTer als onderbetaalde uitvinder [Print]. De ICTer als onderbetaalde uitvinder.
  • Sloot, P. (01-01-2011). Opening Advanced Computing Laboratory [Print]. Opening Advanced Computing Laboratory.
  • Sloot, P. (19-09-2010). Wetenschap in Amsterdam [Print] Amsterdam, Amsterdam FM Radio. Wetenschap in Amsterdam.
  • Sloot, P. (31-07-2010). The Fascination [Print] UvA, Amsterdam. The Fascination.
  • Sloot, P. (06-06-2010). Computer model predicts best HIV medication [Print] UvA, Amsterdam. Computer model predicts best HIV medication.
  • Sloot, P. (01-01-2010). Leading Scientist Award [Print]. Leading Scientist Award.
  • Sloot, P. (01-01-2010). Leading Scientist Award [Print]. Leading Scientist Award.
  • Sloot, P. (01-01-2010). Voorspellen als wetenschap [Print]. Voorspellen als wetenschap.
  • Sloot, P. (01-01-2010). Leading Scientist Award [Print]. Leading Scientist Award.
  • Sloot, P. (01-01-2010). Interview for "SurfWEBcahier" March 2005 [Print]. Interview for "SurfWEBcahier" March 2005.
  • Sloot, P. (01-01-2010). Computational Modeling reveals a better understanding of invasive tumor growth and response to therapy of solid malignancies. [Print]. Computational Modeling reveals a better understanding of invasive tumor growth and response to therapy of solid malignancies..
  • Sloot, P. (01-01-2010). Leading Scientist Award [Print]. Leading Scientist Award.
  • Sloot, P. (01-01-2010). Cellular automatons revisited [Print] UvA, Amsterdam. Cellular automatons revisited.
  • Sloot, P. (01-01-2010). Leading Scientist Award [Print]. Leading Scientist Award.
  • Sloot, P. (01-01-2009). Interview on Virolab [Print]. Interview on Virolab.
  • Sloot, P. (01-01-2009). Early Warning Software to prevent flooding [Print]. Early Warning Software to prevent flooding.
  • Sloot, P. (01-01-2009). Super Computer netwerk voorspelt rampen [Print]. Super Computer netwerk voorspelt rampen.
  • Sloot, P. (01-01-2009). Hoe?Zo! Radio of Teleac/NOT: Drug Resistance model HIV [Print]. Hoe?Zo! Radio of Teleac/NOT: Drug Resistance model HIV.
  • Sloot, P. (01-01-2009). Drug Ranking Computational Model [Print]. Drug Ranking Computational Model.
  • Sloot, P. (01-01-2009). Early Warning Software to prevent flooding [Print]. Early Warning Software to prevent flooding.
  • Sloot, P. (01-01-2009). Software waarschuwt voor rampen [Print]. Software waarschuwt voor rampen.
  • Sloot, P. (01-01-2009). Urban Flooding [Print]. Urban Flooding.
  • Sloot, P. (01-01-2007). I/O InformaticaOnderzoek, 4(2), April 2007 (in Dutch) has interviews with Peter Sloot and two of our Computer Science students about Computer Science education in the Netherlands [Print]. I/O InformaticaOnderzoek, 4(2), April 2007 (in Dutch) has interviews with Peter Sloot and two of our Computer Science students about Computer Science education in the Netherlands.
  • Sloot, P. (20-06-2006). Interview in the "Hoe? Zo!" magazine on Dutch Radio on Virolab [Print]. Interview in the "Hoe? Zo!" magazine on Dutch Radio on Virolab.
  • Sloot, P. (01-01-2006). Interview in "Transfer - Vakblad over Internationalisering in het Hoger Onderwijs" vol. 13, July 2006 [Print]. Interview in "Transfer - Vakblad over Internationalisering in het Hoger Onderwijs" vol. 13, July 2006.
  • Sloot, P. (01-01-2006). Interview in the Folia magazine [Print]. Interview in the Folia magazine.
  • Sloot, P. (01-01-2006). Interview in the staff magazine of the UvA [Print]. Interview in the staff magazine of the UvA.
  • Sloot, P. (01-04-2005). Research on Cellular Automata [Print]. Research on Cellular Automata.
  • Sloot, P. (26-02-2005). Interview for NRC Handelsblad [Print]. Interview for NRC Handelsblad.
  • Sloot, P. (01-01-2004). Emergence of Traffic Jams [Print]. Emergence of Traffic Jams.
  • Sloot, P. (01-01-2004). Grid Computing [Print]. Grid Computing.
  • Sloot, P. (01-01-2004). How To Plug Europe's Brain Drain [Print]. How To Plug Europe's Brain Drain.

Journal editor

  • Sloot, P. M. A. (editor) (2011). Future Generation Computer Systems (Journal).
  • Sloot, P. M. A. (editor) (2011). Journal of Computational Science (Journal).
  • Sloot, P. M. A. (editor) (2010). International Transactions on Systems Science and Applications (Journal).
  • Sloot, P. M. A. (editor) (2010). International Journal of Information Retrieval Research (Journal).
  • Sloot, P. M. A. (editor) (2010). Future Generation Computer Systems (Journal).
  • Sloot, P. M. A. (editor) (2010). Journal of Computational Science (Journal).
  • Sloot, P. M. A. (editor) (2009). Journal of Computational Science (Journal).
  • Sloot, P. M. A. (editor) (2009). Future Generation Computer Systems (Journal).
  • Sloot, P. M. A. (editor) (2009). International Journal of Information Retrieval Research (Journal).
  • Sloot, P. M. A. (editor) (2009). International Transactions on Systems Science and Applications (Journal).
  • Sloot, P. M. A. (editor) (2008). Future Generation Computer Systems (Journal).
  • Sloot, P. M. A. (editor) (2008). Future Generation Computer Systems (Journal).
  • Sloot, P. M. A. (editor) (2008). International Transactions on Systems Science and Applications (Journal).
  • Sloot, P. M. A. (editor) (2007). Future Generation Computer Systems (Journal).
  • Sloot, P. M. A. (editor) (2007). International Transactions on Systems Science and Applications (Journal).
  • Sloot, P. M. A. (editor) (2007). Future Generation Computer Systems (Journal).
  • Sloot, P. M. A. (editor) (2006). International Transactions on Systems Science and Applications (Journal).
  • Sloot, P. M. A. (editor) (2006). Future Generation Computer Systems (Journal).
  • Sloot, P. M. A. (editor) (2006). Future Generation Computer Systems (Journal).
  • Sloot, P. M. A. (editor) (2005). Future Generation Computer Systems (Journal).
  • Sloot, P. M. A. (editor) (2003). Future Generation Computer Systems (Journal).
  • Sloot, P. M. A. (editor) (2002). Future Generation Computer Systems (Journal).
  • Sloot, P. M. A. (editor) (2001). Future Generation Computer Systems (Journal).

Talk / presentation

  • Quax, R. (speaker) & Sloot, P. M. A. (speaker) (18-9-2013). Dissipation and integration of Shannon information, IPCS satellite meeting during ECCS'13, Barcelona.
  • Sloot, P. M. A. (invited speaker) (15-11-2012). ICT an as `enabling technology'. Position of the Netherlands and areas for cooperation, Russian-Dutch University Partnerships: Shaping Innovative Academic and Research Agenda, Moscow.
  • Sloot, P. M. A. (invited speaker) (22-10-2012). Information Spreading in Complex Agent Networks: An Odyssey from a virus' point of view, IEEE CIT 2012, Chengdu, China.
  • Sloot, P. M. A. (invited speaker) (22-10-2012). Computational Science: building virtual worlds, Invited lecture, National University of Defense Technology, Changsha, China.
  • Sloot, P. M. A. (invited speaker) (18-9-2012). De Russische Wetenschap Renaissance, Spui 25, Licht op Rusland, Amsterdam.
  • Sloot, P. M. A. (invited speaker) (14-8-2012). Networks: Complex Futures, LERU Bright Conference 2012, Amsterdam.
  • Sloot, P. M. A. (invited speaker) (3-7-2012). Modelling for Pandemic Preparedness, Singapore Cooperation Programme, Singapore.
  • Sloot, P. M. A. (invited speaker) (18-6-2012). The Inspiration of Alan Turing, Kenniscafé, Amsterdam.
  • Sloot, P. M. A. (invited speaker) (14-5-2012). Sex and the City: Modelling HIV from Molecule to Mankind, Lecture, Amsterdam; Het Genootschap ter bevordering van Natuur-, Genees- en Heelkunde, Sanguin/AMC.
  • Sloot, P. M. A. (invited speaker) (2-12-2011). "Move over Darwin, Marx and Einstein: We will take it from here! ", 30 Jaar Informatica, Amsterdam.
  • Sloot, P. M. A. (invited speaker) (23-6-2011). Flop/s that work for you!, SuperComputing Education Prospectives, St. Petersburg.
  • Sloot, P. M. A. (invited speaker) (10-11-2010). The Game of Life and Death, Dag van de Zelforganistie, Rotterdam.
  • Sloot, P. M. A. (invited speaker) (15-7-2010). Of Molecules and Man, VPH-Talks, Bonn, Germany.
  • Sloot, P. M. A. (invited speaker) (11-5-2010). Gridbased Decision Support in Medicine, GPC 2010, Hualien, Taiwan.
  • Sloot, P. M. A. (invited speaker) (10-5-2010). Fighting AIDS with computational science, IIS Taipei Seminar, Academica Sinica Taipei, Taiwan.
  • Sloot, P. M. A. (invited speaker) (18-3-2010). Simuleren voor gezondheid, ICT Delta, WTC Delta.
  • Sloot, P. M. A. (invited speaker) (24-2-2010). Mesoscopic modelling of growth and form, SDWA Meeting, NUS, Singapore.
  • Sloot, P. M. A. (invited speaker) (11-2-2010). Sex and the City: Modelling HIV from Molecule to man, Health Services & Systems Research, Duke-NUS Medical School, Singapore.
  • Sloot, P. M. A. (invited speaker) (3-2-2010). A discrete world: If Cellular automata are the answer, then what was the question?, SCE Seminar, Singapore.
  • Sloot, P. M. A. (invited speaker) (20-11-2009). Understanding epidemics through eScience, Dutch Boards of Universities, UvA, Amnsterdam, NL.
  • Sloot, P. M. A. (invited speaker) (5-11-2009). Acceptance Talk for the NSF I/O Award, Sirene 2009, University of Twente, NL.
  • Sloot, P. M. A. (invited speaker) (24-9-2009). Comparatieve HIV Drugranking, Infectious diseases, Amsterdam Medical Center, NL.
  • Sloot, P. M. A. (invited speaker) (25-8-2009). Sex and the City: Modelling HIV from Molecule to Man, International Conference on Convergence and Hybrid Information Technology, Daejeon.
  • Sloot, P. M. A. (invited speaker) (13-7-2009). Sex and the City: Modelling HIV from Molecule to Man, WORLDCOMP 09, Las Vegas USA.
  • Sloot, P. M. A. (invited speaker) (8-6-2009). Complex Networks in Solid Tumour Metastasis, NAKFI Meeting Washington Toretski Lab, Washington USA.
  • Sloot, P. M. A. (invited speaker) (5-6-2009). Computational Science for Catastrophes, PvdA en vz 2de kamer, Amsterdam.
  • Sloot, P. M. A. (invited speaker) (24-4-2009). ‘Sex and the City’: Eenvoudige Modellen voor Complexe-Netwerken, Leve de Wiskunde Congres, CWI, Amsterdam.
  • Sloot, P. M. A. (invited speaker) (2-4-2009). Mesoscopic Bloodflow Simulations, ONERA Science Colloquium, Paris, France.
  • Sloot, P. M. A. (invited speaker) (2-4-2009). Modelling Infectious Diseases with Cellular Automata and Complex Networks, ONERA Science Colloquium, Paris, France.
  • Sloot, P. M. A. (invited speaker) (20-3-2009). Modelling Sexual Contact Networks and HIV, Spatial dynamics symposium, Gainesville USA.
  • Sloot, P. M. A. (invited speaker) (15-3-2009). Mesoscopic modelling of Dynamical Systems, MU seminair, Miami University USA,.
  • Sloot, P. M. A. (invited speaker) (16-2-2009). The end of gridcomputing, the beginning of eScience, Perspectives Seminar: The future of GridComputing, Dagstuhl Germany.
  • Sloot, P. M. A. (invited speaker) (7-2-2009). Sex and the city: Modelling contact networks, PDCC Seminar, Singapore NTU.
  • Sloot, P. M. A. (invited speaker) (6-2-2009). The Limits of Computing, PDCC Seminar, Singapore NTU.
  • Sloot, P. M. A. (invited speaker) (20-1-2009). Multi-scale modeling of HIV dynamics using a Gridbased System-level approach, NTU SCE Seminar, Singapore.
  • Sloot, P. M. A. (invited speaker) (2008). Complex System Simulation: Guest Lectures, AGH and WSZIB, May 5th - 14th, Krakow, Poland.
  • Sloot, P. M. A. (invited speaker) (2008). HIV drug-ranking: Bridging the Scales from Molecule to Man, The National Academies, Keck Future Initiatives, November 12 - 15th, Irvine, California.
  • Sloot, P. M. A. (invited speaker) (7-11-2008). Challenges of Multiscale modeling and simulation, -, Omaha, University of Nebraska.
  • Sloot, P. M. A. (invited speaker) (22-10-2008). Virolab: Modeling Infectious Diseases, The Virtual Physiological Human, Brussels, Belgium.
  • Sloot, P. M. A. (invited speaker) (17-10-2008). VIROLAB: a virtual laboratory for infectious diseases, Facing the Challenge of Infectious Diseases – Integrating mathematical modeling, computational thinking, and ICT, Turin, Italy.
  • Sloot, P. M. A. (invited speaker) (29-9-2008). Computational eScience: Bridging the Scales from Molecule to Man, High Performance Applications Workshop, Santiago de Compostela, Spain.
  • Sloot, P. M. A. (invited speaker) (23-9-2008). Computational eScience: How complex Systems in Silico can drive Multicore Processing, Simulating the Future; Using One Million Cores and Beyond, Lyon, France.
  • Sloot, P. M. A. (invited speaker) (9-9-2008). e-Science from Molecule to Man, eScience AHM, Edinburgh, Scotland.
  • Sloot, P. M. A. (invited speaker) (4-7-2008). ViroLab: Distributed Decision Support in a virtual laboratory for infectious diseases, HPC 200, Cetraro, Italy.
  • Sloot, P. M. A. (invited speaker) (4-6-2008). Ranking Drugs in HIV, HealthGrid, BioGrid, Chicago.
  • Sloot, P. M. A. (invited speaker) (2-6-2008). Multi-scale modeling of HIV dynamics using a Gridbased System-level approach, HealthGrid, Chicago.
  • Sloot, P. M. A. (invited speaker) (26-5-2008). Understanding and Fighting HIV/AIDS with Computational Science, The Netherlands Institute in Saint-Petersburg.
  • Sloot, P. M. A. (invited speaker) (23-5-2008). Understanding and Fighting HIV/AIDS with Computational Science, Public Lectures on Arts and Sciences, St. Petersburg, NIP.
  • Sloot, P. M. A. (invited speaker) (15-5-2008). Integration of evidence for Infectious diseases decision support, Krakow Grid Seminar, AGH, Krakow, Poland.
  • Sloot, P. M. A. (invited speaker) (28-3-2008). Percolation in Complex Networks, Colbud Institute for Advanced Study, Budapest.
  • Sloot, P. M. A. (invited speaker) (27-3-2008). Linking Virolab to Euresist, 6th European HIV Drug Resistance Workshop, Budapest.
  • Sloot, P. M. A. (invited speaker) (10-3-2008). Computational eScience, NCF-NWO voordracht, Baarn, Netherlands.
  • Sloot, P. M. A. (invited speaker) (5-3-2008). Scaling behavior of Complex Networks, ITMO, St. Petersburg, Russia.
  • Sloot, P. M. A. (invited speaker) (2007). eScience in a real world, ICT Delta, Utrecht.
  • Sloot, P. M. A. (invited speaker) (2007). Multiscale Modeling and Simulation, Onera, Paris.
  • Sloot, P. M. A. (invited speaker) (2007). Huygens Lezing, Huygens Lezing Amsterdam, Amsterdam.
  • Sloot, P. M. A. (invited speaker) (2007). Virolab: Modeling HIV from molecule to epidemiology, Edinburgh UK 14-16 March.
  • Sloot, P. M. A. (invited speaker) (2007). The limits of Computing, StP State Uni, 25 Jan. - 01 Feb., St Petersburg.
  • Sloot, P. M. A. (invited speaker) (24-10-2007). Virolab: Modeling HIV from molecule to epidemiology, eChallenges, 24/10 - 26/10, The Hague.
  • Sloot, P. M. A. (invited speaker) (15-10-2007). Virolab: Modeling HIV from molecule to epidemiology (keynote), CGW 07, 15/10 - 19/10, Krakow, Polen.
  • Sloot, P. M. A. (invited speaker) (11-10-2007). Challengers 2007 (keynote), Challengers 2007, 11/10 - 12/10, Athens.
  • Sloot, P. M. A. (invited speaker) (30-9-2007). Complex Networks for Spreading phenomena, ECCS, 30/9 - 5/10, Dresden.
  • Sloot, P. M. A. (invited speaker) (3-9-2007). Mapping parallel algorithms to parallel systems (keynote), PACT, 3-7 September, Pereslav, Rusland.
  • Sloot, P. M. A. (invited speaker) (27-8-2007). Automata 2007 (keynote), Automata 2007, 27-29 August, Toronto, Canada.
  • Sloot, P. M. A. (invited speaker) (1-7-2007). Bio computing: The challenge of the Scales (keynote), Istanbul Turkey, 1 - 9 July.
  • Sloot, P. M. A. (invited speaker) (29-6-2007). Multi-scale modeling of HIV dynamics using a Gridbased System-level approach, Talia's Uni Virolab, Italy.
  • Sloot, P. M. A. (invited speaker) (26-6-2007). A plethora of distributed resource scheduling (keynote), HPCC Cetraro, 26 - 29 June, Italy.
  • Sloot, P. M. A. (invited speaker) (14-5-2007). The Virolab Virtual Laboratory (keynote), CCGRID/BioGrid, 14-17 May, Rio de Janero, Brazil.
  • Sloot, P. M. A. (invited speaker) (24-4-2007). Drug ranking by molecular modeling (keynote), HealthGrid, 24-27 April, Geneve.
  • Sloot, P. M. A. (invited speaker) (13-3-2007). Multiscale Computation, CWI Amsterdam Bricks Symposium, Amsterdam.
  • Sloot, P. M. A. (speaker) (2006). Handling Complexity (Laudation for Carl Kesselman, dr. hc.), Amsterdam 2006.
  • Sloot, P. M. A. (invited speaker) (2006). Mesoscopic Modeling and Simulation, GIREP2006: Modeling in Physics and Physics education: Amsterdam 20-25 Augustus, Amsterdam.
  • Sloot, P. M. A. (invited speaker) (2006). The fifth International Conference on Distributed Computing and Applications for business, engineering and sciences, DCABES2006, Hangzou, China.
  • Sloot, P. M. A. (speaker) (2006). IST Helsinki Virolab: Workshop, IST Helsinki.
  • Sloot, P. M. A. (invited speaker) (2006). IST Helsinki: Bridging Scales PLenair, IST Helsinki.
  • Sloot, P. M. A. (invited speaker) (2006). ViroLab: A Virtual Laboratory for Infectious Diseases, Cracow Grid Workshop 2006, Poland.
  • Sloot, P. M. A. (invited speaker) (4-12-2006). eScience in perspective, eScience Conference 2006, Amsterdam.
  • Sloot, P. M. A. (invited speaker) (11-11-2006). Modeling growth and form, Catholic Univ. of Daegu, Hannam University (Daejeon), Daegu, Korea.
  • Sloot, P. M. A. (invited speaker) (8-11-2006). Percolation in realworld networks, Int. Conf on Hybrid Information Technology, Cheju Island, Korea.
  • Sloot, P. M. A. (invited speaker) (9-10-2006). Time warping simulations Hangzou, DCABES, China.
  • Sloot, P. M. A. (invited speaker) (10-6-2006). Modeling Solid Tumor Growth with Cellular Automata, Athens ACGT, Athens.
  • Sloot, P. M. A. (invited speaker) (3-4-2006). Modeling Multi-Cellular Organisms with Distributed Cellular Automata, Computational Science Workshop, Krakow, Poland.
  • Sloot, P. M. A. (invited speaker) (2005). Living Simulations, Simulation, Visualisation, Interaction, Mixed Reality (June 15-16 2005), Brussels.
  • Sloot, P. M. A. (invited speaker) (2005). Novel methods and techniques for modeling, simulation and grid-computing applied to vascular reconstruction (keynote), 3rd International Conference on Functional Imaging and Modeling of the Heart (june 2005), Barcelona.
  • Sloot, P. M. A. (invited speaker) (2005). Generation of Growth and Form Patterns with Cellular Automata: The curse of spatio-temporal dimensionality, NWO, Den Haag, The Netherlands, January 10.
  • Sloot, P. M. A. (invited speaker) (2005). Simulating Virology with Cellular Automata, Academic Hospital Utrecht, The Netherlands, January 05.
  • Sloot, P. M. A. (invited speaker) (2-12-2005). Gridbus Seminar, Melbourne University.
  • Sloot, P. M. A. (invited speaker) (9-11-2005). Modeling Multi-Cellular Organisms with Distributed Cellular Automata, National Grid Seminar Series, Institute for Infocomm Research, Singapore.
  • Sloot, P. M. A. (invited speaker) (26-10-2005). Modeling Multi-Cellular Organisms with Distributed Cellular Automata: 'Simple Computational Models for Complex Biology', Griffith University, Cold-Coast Campus, Computational Science Seminar.
  • Sloot, P. M. A. (invited speaker) (20-10-2005). Grid-based Virtual By-pass Surgery, Griffith University, Nathan Campus, IIIS-Seminar.
  • Sloot, P. M. A. (invited speaker) (2-6-2005). The Grid for complex systems simulations, Future Emerging Technologies, Brussels.
  • Sloot, P. M. A. (invited speaker) (10-5-2005). A Grid-based HIV Expert System, CCGrid (ioGrid05-02).
  • Sloot, P. M. A. (invited speaker) (21-4-2005). The Limits of Computing, AGH, University of Science and Technology, Krakow, Poland, April 21.
  • Sloot, P. M. A. (invited speaker) (1-3-2005). Pattern Formation and Computational Complexity, Cambridge Microsoft Research.
  • Sloot, P. M. A. (invited speaker) (22-2-2005). High Performance GridComputing, Iceland Express Seminars on Advanced Computer Science, University of Akureyri , Iceland.
  • Sloot, P. M. A. (invited speaker) (7-2-2005). Cellular Automata modelling of complex systems (Keynote Lecture), St. Petersburg State University. Workshop on Discrete Automata, Keynote Lecture.

Others

  • Quax, R. (organiser), Hoekstra, A. (organiser), Merelli, E. (organiser) & Sloot, P. M. A. (organiser) (18-9-2013). ECCS conferentie, Barcelona, Spanje. Information processing in complex systems (IPCS'13) All systems in nature have one thing in common: they process information. Information is (…) (organising a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (3-10-2012). Erasmus, AGH, Krakow. The 3rd paradigm of science: Educating future scientists (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (25-6-2012). Complexity Science takes charge of viral infections, Liverpool (UK) (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (6-12-2011). Simulating Complex Societal Networks: Understanding Pandemics, Johann Bernoulli Institute for Mathematics and Computer Science, Groningen (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (21-10-2011). Simulating Agent Based Complex Networks, Singapore (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (20-6-2011). Wetenschappelijke Modellen: wat kunnen we ermee?, Amsterdam, Royal Academy of Science (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (8-4-2011). The Computational Beauty of Life, St. Petersburg, Russia (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (7-4-2011). NESO, Moskow, Russia. The Computational Beauty of Life (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (14-3-2011). Complexity Science Conference, Center of Advanced Studies, NTU, Singapore. HIV incidence: Modeling the trade-off between better treatment and behavioral changes (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (26-1-2011). Multi-scale modelling of the Infectious Diseases, Imperial College London, UK (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (10-10-2010). Dag van de Zelforganizatie, Rotterdam. Self-organization in Epidemics: A case of information spreading (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (31-5-2010 - 2-6-2010). International Conference on Computational Science, Amsterdam. General Chair ICCS (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2008). eScience 2008. Programme committee eScience 2008 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2008). FIMH 2008. Programme committee FIMH 2008 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2008). ICHIT 2008. Programme committee ICHIT 2008 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2008). InfoScale 2008. Programme committee InfoScale 2008 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2008). BioGrid 2008. Programme committee BioGrid 2008 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2008). DCABES 2008. Programme committee DCABES 2008 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2008). CODS 2008. Programme committee CODS 2008 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2008). IPDPS 2008. Programme committee IPDPS 2008 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2008). MTPP 2008. Programme committee MTPP 2008 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2008). ICCS 2008. Programme committee ICCS 2008 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2008). Overall Chair of the International Conference on Computational Science ICCS 2008, Krakow, Poland (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2008). AUTOMATA 2008. Programme committee AUTOMATA 2008 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2008). CoreGrid 2008. Programme committee CoreGrid 2008 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2008). CSIT 2008. Programme committee CSIT 2008 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2007). ICCS 2007, Beijing. Overall Chair of the International Conference on Computational Science ICCS 2007 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2007). ICCS 2007, Beijing. Overall Chair of the International Conference on Computational Science ICCS 2007 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2007). ICCS 2007, Beijing. Overall Chair of ICCS 2008 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2007). Programme committee Infoscale 2007 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2007). CoreGrid 2007. Programme committee CoreGrid 2007 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2007). MTPP 2007. Programme committee MTPP 2007 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2007). CSIT 2007. Programme committee CSIT 2007 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2007). IPDPS 2007. Programme committee IPDPS 2007 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2007). ICHIT 2007. Programme committee ICHIT 2007 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2007). Programme committee CODS 2007 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2007). ICCS 2007, Beijing. Programme committee International Conference on Computational Science 2007 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2007). FIMH 2007. Programme committee FIMH 2007 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2007). IPDPS 2006. Programme committee IPDPS 2006 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2006). 3-4 April, Krakow, Poland. Computational Science Workshop (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2006). ICCS 2006. Overall Chair of the International Conference on Computational Science ICCS 2006 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2006). ICCS 2006, Reading. Programme committee International Conference on Computational Science 2006 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2006). Programme committee International Conference on Computational Science 2006, Reading, UK (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2006). IEEE eScience Conference 2006, Amsterdam. Overall Chair of the IEEE eScience Conference 2006 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2006). IEEE Cluster 2006. Programme committee IEEE Cluster 2006 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2006). Programme committee ICHIT 2006 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2006). CGW 2006. Cracow Grid Workshop 2006 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2006). eScience 2006. Programme committee eScience 2006 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2006). Programme committee ICHIT 2006 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2006). IEEE-PADS 2006. Programme committee IEEE-PADS 2006 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2006). CCGRID 2006. Programme committee CCGRID 2006 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2006). Steering Committee Biogrid (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2006). Programme committee DCABES 2006 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2006). Overall Chair of the International Conference on Computational Science ICCS 2006 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2006). Dagstuhl seminar on Architectures and Algorithms for Petascale Computing (Organiser) (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (10-7-2006). ACGT workshop on in Silico Oncology, Athens (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2005). Programme committee European Grid Conference 2005, Amsterdam (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2005). Programme committee IPDPS (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2005). Programme committee CCGRID 2005 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2005). HiPC 2005. Programme committee HiPC 2005 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2005). Initiator and general Chair European Grid Conference EGC 2005 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2005). Programme committee IEEE Cluster (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2005). Programme committee International Conference on Computational Science 2005, Atlanta (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2005). ICCS 2005, Atlanta. Overall Chair of the International Conference on Computational Science ICCS 2005 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2005). Programme committee IEEE-PADS 2005 (participating in a conference, workshop, ...).
  • Sloot, P. M. A. (participant) (2005). Programme committee HiPC 2005 (participating in a conference, workshop, ...).

2018

  • Abdol, A. M. (2018). Toward reverse engineering spatiotemporal gene regulatory networks of Nematostella vectensis [details] 
  • Alowayyed, S. A. (2018). Patterns for multiscale computing [details] 

2017

  • Har Shemesh, O. (2017). Phase transitions in complex systems: An information geometric approach [details] 

2016

  • Botman, D. (2016). Spatial gene expression quantification in changing morphologies [details] 
  • Javaheri, N. (2016). Biosilicification mechanisms: An investigation using computational modeling and experimentation [details] 
  • de Graaf, C. S. L. (2016). Efficient PDE based numerical estimation of credit and liquidity risk measures for realistic derivative portfolios [details] 

2015

  • Mountrakis, L. (2015). Transport of blood cells studied with fully resolved models [details] 

2014

2013

2011

2010

2009

2007

  • Axner, L. (2007). High performance computational hemodynamics with the Lattice Boltzmann method [details] 
  • Tirado Ramos, A. (2007). Collaborative software architectures for interactive biomedical applications [details] 
  • Yurkin, M. A. (2007). Discrete dipole simulations of light scattering by blood cells [details] 

2006

2005

2003

1998

  • Voogd, J. M. (1998). Crystallisation on a Sphere - Computational Studies of two-dimensional Lennard-Jones Systems Amsterdam, The Netherlands
  • de Ronde, J. F. (1998). Mapping in High Performance Computing - A Case Study in Finite Element Simulation

1994

  • Hoekstra, A. G. (1994). Computer Simulations of Elastic Light Scattering [details] 

1988

  • Sloot, P. M. A. (1988). Elastic light scattering from leukocytes in the development of computer assisted cell separation [details] 

2013

  • Erdbrink, C. D., Krzhizhanovskaya, V. V., & Sloot, P. M. A. (2013). Evolutionary Design of Numerical Methods: Generating Finite Difference and Integration Schemes by Differential Evolution. Ithaca, NY: arXiv.org. [details] 
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